A0A1Q7FFY8F1

Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (81%)
Global pLDDT
92.68
Species
Candidatus Nitrososphaera sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1Q7FFY8
PDB structures
-
Model length
238
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.8 151-198 48 1-150, 199-238 150 40
Model Sequence
MTLIIAEAALETVPREIASHAAVRNHAHSLGRHPSETLLDRSYHHAAMSRLQDNSKRGRPDIVHFALMEALSTPIFMKCKLRVYVHTIDDKLITIAENLRIPKSYFRFEGLVMGLFRDKMVKSDQGAVLMEISDGTFEDLLNAVKPERVIGLSTTGVQSNAEKVVTENLVDDCALVVGGFPRGHFSESTTRLLNLTYSISDIPFEAHVVIARILYECEKLLEKGIHHEGDEKRRQVRA
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (85%)
Global pLDDT
92.58
Species
Candidatus Nitrososphaera sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
238
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.1 151-198 48 1-150, 199-238 150 40
Model Sequence
MTLIIAEAALETVPREIASHAAVRNHAHSLGRHPSETLLDRSYHHAAMSRLQDNSKRGRPDIVHFALMEALSTPIFMKCKLRVYVHTIDDKLITIAENLRIPKSYFRFEGLVMGLFRDKMVKSDQGAVLMEISDGTFEDLLNAVKPERVIGLSTTGVQSNAEKVVTENLVDDCALVVGGFPRGHFSESTTRLLNLTYSISDIPFEAHVVIARILYECEKLLEKGIHHEGDEKRRQVRA
Comments
Domain Archaea
Family Nitrososphaeraceae
Species (Full Name) Candidatus Nitrososphaera sp. 13_1_40CM_48_12
Gene nep1 AUH37_01830
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR023503,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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