A0A1R1S9V8 | AlphaKnot 2.0

AF4

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Information

Protein name	Lantibiotic biosynthesis protein
Main knot	3₁ (75%)
Global pLDDT	87.93
Species	Streptomyces sparsogenes
UniProt	A0A1R1S9V8
Structure Prediction Model	AlphaFold v4: A0A1R1S9V8
PDB structures	-
Model length	337
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.5	168-318	151	1-167, 319-337	167	19

Model Sequence

MHLFHQGDLDTLLLEAVVPALTGLARDGRVLGHFFLRYWEGGPHLRVRVLSAPPDGAGAHDTARELVARWNAWLRDHPSPRSVDEAAYLGFADQAAAREGLSGYEPWRALHDHAEPRPYLPEHDRYGTGASLVAVERHFMEASDCAEALLARRPPPAERLSAGLAVVLLTWAVVEPDPRRRLDALSAGAKAWRRMLGPAYDTEAFDRAYARARPALVRRAGQLLDPGAGQLLDPAARARPDGPTGPVAAWHDSISRLHATLQTLEAAGSFTPDLAALRDDPSLLALPSPRAALTANRCAHLMCNRLGLYGLQEALLRHLAARAAADLHTAEAGGHRP

Comments

ESM1

Categories voted by users:

Information

Protein name	Lantibiotic biosynthesis protein
Main knot	3₁ (56%)
Global pLDDT	90.22
Species	Streptomyces sparsogenes
UniProt	A0A1R1S9V8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	337
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.7	168-318	151	1-167, 319-337	167	19

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces sparsogenes DSM 40356
Gene	SPAR_32956
PFAM codes	PF14028
InterPro codes	IPR023809
PDB structures (whole Protein)	-

A0A1R1S9V8F1

AF4

Model Sequence

ESM1

Model Sequence