| Protein name |
rRNA methyltransferase
|
| Main knot |
31 (73%)
|
| Global pLDDT |
91.3
|
| Species |
Rhodoferax fermentans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1T1APW5
|
| PDB structures |
-
|
| Model length |
261
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.4 | 1-243 | 243 | 244-261 | 0 | 18 |
|
Model Sequence |
MKTRFILINTSHAGNVGAAARAMKTMGFDDLVLVAPRWANVLRREETIQRASGATDVLKNCRIVDTLDEALDGMSHLCATAMTPRDFGPPTVRPREHFQSLVKQELLAQSEQGLEAEKASNSGVAFLFGSERFGMANEDVYRCHVCLSIPSNPQFGSLNLAAALQVIAYDWREALGGYPVQSATAAPALADAAQVAGMLAHLEQALVAIDFLDPQAPKKLMPRLNQLFNRAGVTQEEIHILRGMAKMMLKAAPSTPLPESH
|
| Protein name |
rRNA methyltransferase
|
| Main knot |
31 (74%)
|
| Global pLDDT |
92.1
|
| Species |
Rhodoferax fermentans
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
261
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
96.3 | 1-261 | 261 | 0 | 0 |
|
Model Sequence |
MKTRFILINTSHAGNVGAAARAMKTMGFDDLVLVAPRWANVLRREETIQRASGATDVLKNCRIVDTLDEALDGMSHLCATAMTPRDFGPPTVRPREHFQSLVKQELLAQSEQGLEAEKASNSGVAFLFGSERFGMANEDVYRCHVCLSIPSNPQFGSLNLAAALQVIAYDWREALGGYPVQSATAAPALADAAQVAGMLAHLEQALVAIDFLDPQAPKKLMPRLNQLFNRAGVTQEEIHILRGMAKMMLKAAPSTPLPESH
|
A0A1T1APW5
IPR001537