A0A1V2BE75 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
Main knot	3₁ (84%)
Global pLDDT	94.45
Species	Klebsiella terrigena
UniProt	A0A1V2BE75
Structure Prediction Model	AlphaFold v4: A0A1V2BE75
PDB structures	-
Model length	255
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.5	86-131	46	1-85, 132-255	85	124

Model Sequence

MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFAHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFADGLLDCPHYTRPEVLEEMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQAKLLAQFKAEHAQQQHKHDGMA

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
Main knot	3₁ (87%)
Global pLDDT	91.7
Species	Klebsiella terrigena
UniProt	A0A1V2BE75
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	255
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.2	86-131	46	1-85, 132-255	85	124

Model Sequence

Comments

Domain	Bacteria
Family	Enterobacteriaceae
Species (Full Name)	Raoultella terrigena (Klebsiella terrigena)
Gene	trmD BZP36_27030 IMO34_05795 NCTC13038_04398 NCTC9185_02940 NCTC9997_01655
PFAM codes	PF01746
InterPro codes	IPR002649, IPR016009, IPR023148, IPR029026, IPR029028
PDB structures (whole Protein)	-

A0A1V2BE75F1

AF4

Model Sequence

ESM1

Model Sequence