A0A1V4ZJ69F1

Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-)
Main knot
31 (71%)
Global pLDDT
90.49
Species
Methanomassiliicoccales archaeon PtaU1
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1V4ZJ69
PDB structures
-
Model length
219
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.6 151-198 48 1-150, 199-219 150 21
Model Sequence
MRATILIVDAEIEILSRDRSHAAKHRAMTDAVYGQYDVILDNWLHHDLIKFMPGSERRGRPDIVHHALGLLLDSLAYRRGYIDVLVHTRNDELIRFDKHVELPQNYFEYLNLLGHLYTEGHVGSGEGKITIESVSGLEEVLKKIAAEVNIVMTPHGDQKGLEGLLAGFNNQKTCIIFGGFPEGEYRSPAYDLADITVTLGPEWLNINSVTAEILRCLPK
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-)
Main knot
31 (68%)
Global pLDDT
89.63
Species
Methanomassiliicoccales archaeon PtaU1
UniProt
Structure Prediction Model
PDB structures
-
Model length
219
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
61.3 151-197 47 1-150, 198-219 150 22
Model Sequence
MRATILIVDAEIEILSRDRSHAAKHRAMTDAVYGQYDVILDNWLHHDLIKFMPGSERRGRPDIVHHALGLLLDSLAYRRGYIDVLVHTRNDELIRFDKHVELPQNYFEYLNLLGHLYTEGHVGSGEGKITIESVSGLEEVLKKIAAEVNIVMTPHGDQKGLEGLLAGFNNQKTCIIFGGFPEGEYRSPAYDLADITVTLGPEWLNINSVTAEILRCLPK
Comments
Domain Archaea
Family unclassified Methanomassiliicoccales
Species (Full Name) Methanomassiliicoccales archaeon PtaU1.Bin124
Gene nep1 A4E32_00365
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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