A0A1V5TDQ0 | AlphaKnot 2.0

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Information

Protein name	DUF4258 domain-containing protein
Main knot	5₁ (88%)
Global pLDDT	85.39
Species	Ignavibacteria bacterium ADurb
UniProt	A0A1V5TDQ0
Structure Prediction Model	AlphaFold v6: A0A1V5TDQ0
PDB structures	-
Structure in AlphaLasso	A0A1V5TDQ0: LS_2++C
Model length	121
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.97	55-110	56	1-54, 111-121	54	11		Knot
					97.98	66-99	34	1-65, 100-121	65	22		Knot

MKHNSFVKLNRFIISVGMIIILLVLFNISSFSQDKNKIDFKTCTYNGFPLHGKVKFVDSFPDIKVQIVESFPDLRVKIVNSFPDNCGEWKIVESFPDVKIKIVESFPDIKIKFVESFPGKP

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Categories voted by users:

Information

Protein name	DUF4258 domain-containing protein
Main knot	5₁ (89%)
Global pLDDT	85.36
Species	Ignavibacteria bacterium ADurb
UniProt	A0A1V5TDQ0
Structure Prediction Model	AlphaFold v4: A0A1V5TDQ0
PDB structures	-
Structure in AlphaLasso	A0A1V5TDQ0: LS_2++C
Model length	121
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.0	54-111	58	1-53, 112-121	53	10

MKHNSFVKLNRFIISVGMIIILLVLFNISSFSQDKNKIDFKTCTYNGFPLHGKVKFVDSFPDIKVQIVESFPDLRVKIVNSFPDNCGEWKIVESFPDVKIKIVESFPDIKIKFVESFPGKP

Comments

Categories voted by users:

Information

Protein name	DUF4258 domain-containing protein
Main knot	0₁ (95%)
Species	Ignavibacteria bacterium ADurb
UniProt	A0A1V5TDQ0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A1V5TDQ0: LS_2++C
Model length	121
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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MKHNSFVKLNRFIISVGMIIILLVLFNISSFSQDKNKIDFKTCTYNGFPLHGKVKFVDSFPDIKVQIVESFPDLRVKIVNSFPDNCGEWKIVESFPDVKIKIVESFPDIKIKFVESFPGKP

Comments

Domain	Bacteria
Family	unclassified Ignavibacteriae
Species (Full Name)	Ignavibacteria bacterium ADurb.Bin266
Gene	BWY38_02886
PDB structures (whole Protein)	-

A0A1V5TDQ0F1