| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (81%)
|
| Global pLDDT |
91.07
|
| Species |
Desulfobacteraceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1W9WW24
|
| PDB structures |
-
|
| Model length |
249
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
88.7 | 80-133 | 54 | 1-79, 134-249 | 79 | 116 |
|
Model Sequence |
MKPENLSIILVEPQGPINIGSICRSMMNFGFSSLRLVNPCREYLSLDAKKMAMGAFKILEKAELFDDLASALHDIHTAFGTTRRFGKYRKNFLTPSTAGERTNEMDDQTKAALVMGTEDSGLSTKDLELCQHFITIPTHDDYPSMNLSHSLTVLLYEISLKSDAGEKFYDPVPEKPAPGNEIQHMFAHMRQTLLDIDFLDSQNPDHLLRTFRRLFGSAGLSSRDVRIIQGLMSRIDWTEDQRRKTAPKN
|
| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (82%)
|
| Global pLDDT |
91.15
|
| Species |
Desulfobacteraceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
249
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.4 | 1-236 | 236 | 237-249 | 0 | 13 |
|
Model Sequence |
MKPENLSIILVEPQGPINIGSICRSMMNFGFSSLRLVNPCREYLSLDAKKMAMGAFKILEKAELFDDLASALHDIHTAFGTTRRFGKYRKNFLTPSTAGERTNEMDDQTKAALVMGTEDSGLSTKDLELCQHFITIPTHDDYPSMNLSHSLTVLLYEISLKSDAGEKFYDPVPEKPAPGNEIQHMFAHMRQTLLDIDFLDSQNPDHLLRTFRRLFGSAGLSSRDVRIIQGLMSRIDWTEDQRRKTAPKN
|
A0A1W9WW24
IPR001537