| Protein name |
Core-binding (CB) domain-containing protein
|
| Main knot |
61 (56%)
|
| Global pLDDT |
93.42
|
| Species |
Tumebacillus avium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
 A0A1Y0IMA4
|
| PDB structures |
-
|
| Model length |
278
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
94.45 | 54-271 | 218 | 1-53, 272-278 | 53 | 7 |
|
Knot |
Model Sequence |
MYIPEILEGEARGRLRNLYHNIKNTLHLPLVSDVFRVLAHYPSFLTYALETSRSNLLSHHFELLSDQLRALPPPSPPLPQLPSFVTRRDLRGASAVLPVFHYGNAKLLLLTTAWYEALSERPIPGWQQEETFVPPGIPVTFPKNVPLLRTETAPPEVQRLLRQITDTHYGFAPPGDIRALALYPTFLAGAWQGVEGYLHTPWYRDQSRRLLHTAQTLARSLPYPLPLSPGRLQQVLSEREIASCLSIIAMYRSLLPKLILDTELMMGLLKQSTQTFWI
|
| Protein name |
Core-binding (CB) domain-containing protein
|
| Main knot |
61 (54%)
|
| Global pLDDT |
93.22
|
| Species |
Tumebacillus avium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A1Y0IMA4
|
| PDB structures |
-
|
| Model length |
278
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.5 | 58-262 | 205 | 1-57, 263-278 | 57 | 16 |
|
Model Sequence |
MYIPEILEGEARGRLRNLYHNIKNTLHLPLVSDVFRVLAHYPSFLTYALETSRSNLLSHHFELLSDQLRALPPPSPPLPQLPSFVTRRDLRGASAVLPVFHYGNAKLLLLTTAWYEALSERPIPGWQQEETFVPPGIPVTFPKNVPLLRTETAPPEVQRLLRQITDTHYGFAPPGDIRALALYPTFLAGAWQGVEGYLHTPWYRDQSRRLLHTAQTLARSLPYPLPLSPGRLQQVLSEREIASCLSIIAMYRSLLPKLILDTELMMGLLKQSTQTFWI
|
| Protein name |
Core-binding (CB) domain-containing protein
|
| Main knot |
61 (49%)
|
| Global pLDDT |
88.88
|
| Species |
Tumebacillus avium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
278
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.6 | 58-262 | 205 | 1-57, 263-278 | 57 | 16 |
|
Model Sequence |
MYIPEILEGEARGRLRNLYHNIKNTLHLPLVSDVFRVLAHYPSFLTYALETSRSNLLSHHFELLSDQLRALPPPSPPLPQLPSFVTRRDLRGASAVLPVFHYGNAKLLLLTTAWYEALSERPIPGWQQEETFVPPGIPVTFPKNVPLLRTETAPPEVQRLLRQITDTHYGFAPPGDIRALALYPTFLAGAWQGVEGYLHTPWYRDQSRRLLHTAQTLARSLPYPLPLSPGRLQQVLSEREIASCLSIIAMYRSLLPKLILDTELMMGLLKQSTQTFWI
|
| Domain |
Bacteria
|
| Family |
Alicyclobacillaceae
|
| Species (Full Name) |
Tumebacillus avium
|
| Gene |
CBW65_11890
|
| PDB structures (whole Protein) |
-
|
A0A1Y0IMA4