| Protein name |
rRNA methyltransferase
|
| Main knot |
31 (80%)
|
| Global pLDDT |
93.59
|
| Species |
Winogradskyella sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1Y0MFB3
|
| PDB structures |
-
|
| Model length |
265
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
94.1 | 193-234 | 42 | 1-192, 235-265 | 192 | 31 |
|
Model Sequence |
MHKSITSPQNPFIKQLIKLKDKSRERKKTGQFLLEGKRELSLAIKGGYTIETLLYFPDLFSESEAKAMEHYTIEIIEISKEVFQKLAYRSTTEGVIAVGKTKPHTLEELKLTSKNPLILVAEAPEKPGNIGALLRTADAANVDAVIIANPKSDIYNPNIIRSSVGCVFTTEIAAASSKDVITYLQKYNFNIFSAILQESEPYHTQDYTLPTAIVVGTEATGLTQEWRDAATQNISIPMQGVIDSMNVSVAAGILIFEAKRQRDFK
|
| Protein name |
rRNA methyltransferase
|
| Main knot |
31 (79%)
|
| Global pLDDT |
96.04
|
| Species |
Winogradskyella sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
265
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
97.8 | 35-115 | 81 | 1-34, 116-265 | 34 | 150 |
|
Model Sequence |
MHKSITSPQNPFIKQLIKLKDKSRERKKTGQFLLEGKRELSLAIKGGYTIETLLYFPDLFSESEAKAMEHYTIEIIEISKEVFQKLAYRSTTEGVIAVGKTKPHTLEELKLTSKNPLILVAEAPEKPGNIGALLRTADAANVDAVIIANPKSDIYNPNIIRSSVGCVFTTEIAAASSKDVITYLQKYNFNIFSAILQESEPYHTQDYTLPTAIVVGTEATGLTQEWRDAATQNISIPMQGVIDSMNVSVAAGILIFEAKRQRDFK
|
A0A1Y0MFB3
IPR001537