| Protein name |
DUF4178 domain-containing protein
|
| Main knot |
31 (78%)
|
| Global pLDDT |
91.5
|
| Species |
Polaribacter sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1Y0MU10
|
| PDB structures |
-
|
| Model length |
173
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
96.2 | 6-156 | 151 | 1-5, 157-173 | 5 | 17 |
|
Model Sequence |
MGYNISGIAINKNYENDFESLCNQLGWNLKKGNEIDFETASENWIDDNICNVYFTKNGTLIFIGMEKCEESFKLENDNVLTFALSETSMVFKINYTEKGIEKRSIIEANEERMEDSGKELAVEKESEDTSEIIWNQIEVLLGKRFFDIELEEKVIQYSFNKNIELKKWWKFWK
|
| Protein name |
DUF4178 domain-containing protein
|
| Main knot |
31 (70%)
|
| Global pLDDT |
79.17
|
| Species |
Polaribacter sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
173
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
85.3 | 7-156 | 150 | 1-6, 157-173 | 6 | 17 |
|
Model Sequence |
MGYNISGIAINKNYENDFESLCNQLGWNLKKGNEIDFETASENWIDDNICNVYFTKNGTLIFIGMEKCEESFKLENDNVLTFALSETSMVFKINYTEKGIEKRSIIEANEERMEDSGKELAVEKESEDTSEIIWNQIEVLLGKRFFDIELEEKVIQYSFNKNIELKKWWKFWK
|
| Domain |
Bacteria
|
| Family |
Flavobacteriaceae
|
| Species (Full Name) |
Polaribacter sp. SA4-12
|
| Gene |
BTO07_01625
|
| PDB structures (whole Protein) |
-
|
A0A1Y0MU10