| Protein name |
rRNA methylase
|
| Main knot |
31 (81%)
|
| Global pLDDT |
92.12
|
| Species |
Zunongwangia atlantica
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1Y1T2Q1
|
| PDB structures |
-
|
| Model length |
268
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
91.9 | 196-237 | 42 | 1-195, 238-268 | 195 | 31 |
|
Model Sequence |
MNTEISSTQNKRIKNLLQLQEKSRNRKKEGKFVVEGLRETGLALKGGFDLLEVYFCPEFFSENEFKSIPNFENSHAEIIEISSEVYQKLAYRQSTEGLIAVFASKENGLKTLNFSNKNPLILVAEAPEKPGNIGAILRTADAANVDAVFIANPKTDLYNPNIIRSSVGCVFTNTIATGTTAEIIDFLQQKNISIYAAALQASEIYTKIDFTQASAIVVGTEATGLNQEWRDAAKQNIIIPMSGAIDSMNVSVAAGILIFEAKRQRSFL
|
| Protein name |
rRNA methylase
|
| Main knot |
31 (79%)
|
| Global pLDDT |
94.98
|
| Species |
Zunongwangia atlantica
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
268
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
96.1 | 35-118 | 84 | 1-34, 119-268 | 34 | 150 |
|
Model Sequence |
MNTEISSTQNKRIKNLLQLQEKSRNRKKEGKFVVEGLRETGLALKGGFDLLEVYFCPEFFSENEFKSIPNFENSHAEIIEISSEVYQKLAYRQSTEGLIAVFASKENGLKTLNFSNKNPLILVAEAPEKPGNIGAILRTADAANVDAVFIANPKTDLYNPNIIRSSVGCVFTNTIATGTTAEIIDFLQQKNISIYAAALQASEIYTKIDFTQASAIVVGTEATGLNQEWRDAAKQNIIIPMSGAIDSMNVSVAAGILIFEAKRQRSFL
|
A0A1Y1T2Q1
IPR001537