A0A1Y2A0C9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (78%)
Global pLDDT	85.94
Species	Clohesyomyces aquaticus
UniProt	A0A1Y2A0C9
Structure Prediction Model	AlphaFold v4: A0A1Y2A0C9
PDB structures	-
Model length	398
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.8	11-248	238	1-10, 249-398	10	150

Model Sequence

VHDKNKWQGFCEIESDPALFSVMIREMGVRGVCVREVYVAEPEFIKENVPEPLLGIILLFKFRPVDPDNEVESCPDNVWFANQLPSQNSCATLAMINMLLNTQDVNLGDHLQQFKEYSEDLNPYHRGQALSTFEFVKRIHNSFAKKQDMLQDDHDLAFKVAKNIKTRRGSLEERRLSASSDECLENQNHFIAFVPIDGKVWKLDGMDKMPTCLGEYDDEEYTWLDFVCDRIQAIMASAGDDGYGVLALAQSPLEGLRKEMCTSIAGTKAIEARLDDLDAEWKAFLETNNDGTVPGAMTSPSLLNSLGIFADQLTAATVSDHLKKKIASEDMPHLLSLREAALKEQVKLQASIMEEMDKESAEDEMAKERRHDYGPVISAWLRMLAENGYIEEVLGQYM

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (80%)
Global pLDDT	88.55
Species	Clohesyomyces aquaticus
UniProt	A0A1Y2A0C9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	398
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.1	12-245	234	1-11, 246-398	11	153

Model Sequence

Comments

Domain	Eukaryota
Family	Lindgomycetaceae
Species (Full Name)	Clohesyomyces aquaticus
Gene	BCR34DRAFT_468278
PFAM codes	PF01088
InterPro codes	IPR001578, IPR036959, IPR038765
PDB structures (whole Protein)	-

A0A1Y2A0C9F1

AF4

Model Sequence

ESM1

Model Sequence