A0A1Y3GCA2F1

Ribonucleoside-diphosphate reductase (EC 1.17.4.1)
AF6
Categories voted by users:
Information
Protein name
Ribonucleoside-diphosphate reductase (EC 1.17.4.1)
Main knot
85 (58%)
Global pLDDT
74.55
Species
Methanonatronarchaeum thermophilum
UniProt
Structure Prediction Model
AlphaFold v6:  A0A1Y3GCA2
PDB structures
-
Structure in AlphaLasso
Model length
1242
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
75.05 175-1062 888 1-174, 1063-1242 174 180 Knot
Model Sequence
MTNPKTKNFKLPPKKTTGQTLEEKLTENAYQKILPARYLKKDKNGNTTETPEEMFMRVAKNIAQPEKNHKNGNYEKTKKQFYNLMTNLKFIPNSPTLMNAGTEIQQLSACFVTHPTDNMDSIFNTVHKAAKIFQSGGGMGYPFHLLRPKGDVVKSTGGIASGPITFQQVFDTMCGTIKQGGRRRGAQMGIMKVDHPDILRFIVSKRKEGNLSNFNISVGVTQEFMKAVKNDEEYELKNPRTGDTHLVTDKTAEFYNKDEEWWPEAQGSDTGKDENFWRDYAHTFGDEIKKHEINLEPGEEMTLPARFIWKTMIDGAWRNGEPGLFMIDQTNKMHSFDTEKHPEHRIEATNPCITGDTYINTDKGFYTAKELYEENIPINVVVDSRKSKEKIKPASRVYKTGTKDVYKIETKEGFELRVTEDHKIMTEKGWKETRELQKGDKIHIQDREGAHNNLHQNENTASKTTNKVQQGTENGAVLLKNNQEKTSYSQKTEFPEQMLHTGNGITRRFLQQTFTEKLLINLDKNPEIKLKGENEFLKKTQLLLINQGIYSEIKNHGESYLVIKNEDVIEFNEKIGLLGDKKKLLQNLDIEKTEKRRKYTAEIQEIVYDGHEDVYDLTEPDTHSFIANGVVVHNCGEQPLENFEACNLGHINLSLLVEEKQDGQAQTFREWRKKNPDYDYESNKGLEKAVADYLRQAMDMEEFERVARIGTRFLDNVITMNDFPLEEIEDKVSKMRKIGLGLMGFAQLLIQLGIRYGSRESIAVAKEIQRLITRFSVEESHRLALSRGEFPEWSESKWADPTEYPEWFERHTGGLNPEEYSDGYLIRNHNTTSIAPTGTTSMIANTSGGCEPIFSLAYFKNVAKDIQGEDMLVEFDDYFIRTLEANNINVEEVKSAAIKKMEKNRWEGVDSIPDETLPPKIKEIFVAADRVKPEEHVDIQAAFQYHNHSGISKTCNFPNEATKKDVEKAYMRAYDKGVKGMTVYRDGSREVQVMKTNIDTQEKNLNKKQLIEKTIKEFGGIKNMIESKEFKETIQQTNIDTDKQKPLLQTLTQNQENIKKGKKTKMGQKTARERPKVVQGETREIETPYGDLYVTINEDKHGPFEVFAQIGKAGGYTQSFTEALGRMISLALRTGASGEEVIKQLDDIRSPQIAWDQGTKIYSVPDAIAEAMKRHLNKTKGVQETVDTYEQQTEEIETHKNNETDTTKIIKEGVNPECPECGGMLTLQEGCKKCPKCGWSEC
Comments
AF4
Categories voted by users:
Information
Protein name
Ribonucleoside-diphosphate reductase (EC 1.17.4.1)
Main knot
85 (57%)
Global pLDDT
74.99
Species
Methanonatronarchaeum thermophilum
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1Y3GCA2
PDB structures
-
Structure in AlphaLasso
Model length
1242
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
75.2 174-1059 886 1-173, 1060-1242 173 183
Model Sequence
MTNPKTKNFKLPPKKTTGQTLEEKLTENAYQKILPARYLKKDKNGNTTETPEEMFMRVAKNIAQPEKNHKNGNYEKTKKQFYNLMTNLKFIPNSPTLMNAGTEIQQLSACFVTHPTDNMDSIFNTVHKAAKIFQSGGGMGYPFHLLRPKGDVVKSTGGIASGPITFQQVFDTMCGTIKQGGRRRGAQMGIMKVDHPDILRFIVSKRKEGNLSNFNISVGVTQEFMKAVKNDEEYELKNPRTGDTHLVTDKTAEFYNKDEEWWPEAQGSDTGKDENFWRDYAHTFGDEIKKHEINLEPGEEMTLPARFIWKTMIDGAWRNGEPGLFMIDQTNKMHSFDTEKHPEHRIEATNPCITGDTYINTDKGFYTAKELYEENIPINVVVDSRKSKEKIKPASRVYKTGTKDVYKIETKEGFELRVTEDHKIMTEKGWKETRELQKGDKIHIQDREGAHNNLHQNENTASKTTNKVQQGTENGAVLLKNNQEKTSYSQKTEFPEQMLHTGNGITRRFLQQTFTEKLLINLDKNPEIKLKGENEFLKKTQLLLINQGIYSEIKNHGESYLVIKNEDVIEFNEKIGLLGDKKKLLQNLDIEKTEKRRKYTAEIQEIVYDGHEDVYDLTEPDTHSFIANGVVVHNCGEQPLENFEACNLGHINLSLLVEEKQDGQAQTFREWRKKNPDYDYESNKGLEKAVADYLRQAMDMEEFERVARIGTRFLDNVITMNDFPLEEIEDKVSKMRKIGLGLMGFAQLLIQLGIRYGSRESIAVAKEIQRLITRFSVEESHRLALSRGEFPEWSESKWADPTEYPEWFERHTGGLNPEEYSDGYLIRNHNTTSIAPTGTTSMIANTSGGCEPIFSLAYFKNVAKDIQGEDMLVEFDDYFIRTLEANNINVEEVKSAAIKKMEKNRWEGVDSIPDETLPPKIKEIFVAADRVKPEEHVDIQAAFQYHNHSGISKTCNFPNEATKKDVEKAYMRAYDKGVKGMTVYRDGSREVQVMKTNIDTQEKNLNKKQLIEKTIKEFGGIKNMIESKEFKETIQQTNIDTDKQKPLLQTLTQNQENIKKGKKTKMGQKTARERPKVVQGETREIETPYGDLYVTINEDKHGPFEVFAQIGKAGGYTQSFTEALGRMISLALRTGASGEEVIKQLDDIRSPQIAWDQGTKIYSVPDAIAEAMKRHLNKTKGVQETVDTYEQQTEEIETHKNNETDTTKIIKEGVNPECPECGGMLTLQEGCKKCPKCGWSEC
Comments
Domain Archaea
Family Methanonatronarchaeaceae
Species (Full Name) Methanonatronarchaeum thermophilum
Gene AMET1_0733
PFAM codes  PF00317,  PF02867
InterPro codes  IPR000788,  IPR003586,  IPR003587,  IPR006141,  IPR006142,  IPR008926,  IPR013509,  IPR030934,  IPR036844
PDB structures (whole Protein) -
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