| Protein name |
Mediator of RNA polymerase II transcription subunit 20
|
| Main knot |
31 (48%)
|
| Global pLDDT |
95.51
|
| Species |
Pseudoflavonifractor sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1Y4LT83
|
| PDB structures |
-
|
| Model length |
172
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
96.6 | 3-103 | 101 | 1-2, 104-172 | 2 | 69 |
|
Model Sequence |
MELGLTFPLQRFLKRRPPPYGAQPDRCFCWDLHVIRLRGCRCLLAVHCRSRYAFVRYDVPPVQWGDLPGLFREGLLESLAAAGFSRSLGEVYLCRAGGIELTRTHGRREVAFLNRAWEDVLELDLCLDTSRQAQPLLDHAVNTRPSRCAGFEGLGTGLERMAAVLCEREAEI
|
| Protein name |
Mediator of RNA polymerase II transcription subunit 20
|
| Main knot |
31 (48%)
|
| Global pLDDT |
79.11
|
| Species |
Pseudoflavonifractor sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
172
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
86.7 | 3-103 | 101 | 1-2, 104-172 | 2 | 69 |
|
Model Sequence |
MELGLTFPLQRFLKRRPPPYGAQPDRCFCWDLHVIRLRGCRCLLAVHCRSRYAFVRYDVPPVQWGDLPGLFREGLLESLAAAGFSRSLGEVYLCRAGGIELTRTHGRREVAFLNRAWEDVLELDLCLDTSRQAQPLLDHAVNTRPSRCAGFEGLGTGLERMAAVLCEREAEI
|
| Domain |
Bacteria
|
| Family |
Oscillospiraceae
|
| Species (Full Name) |
Pseudoflavonifractor sp. An184
|
| Gene |
B5F19_04140
|
| PDB structures (whole Protein) |
-
|
A0A1Y4LT83