| Protein name |
Pectin methylesterase
|
| Main knot |
Unknown (59%)
|
| Global pLDDT |
81.26
|
| Species |
Alteromonadaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1Y6CFA2
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A1Y6CFA2: LS6++++--C LS3+++N
|
| Model length |
1158
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
83.6 | 753-1142 | 390 | 1-752, 1143-1158 | 752 | 16 |
|
Model Sequence |
MFKRTLLSFSVAAALSLSAASSMAELVAFPGAEGYGKNTTGGRGGDVYIVTNLNSSGSGSLGDALSKGGRTVVFAVSGTIKGRFNVPNNTTIAGQTAPGDGITIHGQMTHGSNVIVRYLRVRFDGDGDEDAFGKRYQNNVMIDHVTASWSRDEVMSIYHGENVTIQWSMISEACPNEGTDSHRFGAIWGNNYGTYHHNLIAHNENRTPRWASGGGHNDFRNNVTYNWGYGGSYGAERQQVGNDNFIGTWTNVIANYYKPGPGTESEERIVAPSSRGSGDEGNWYVSDNYVVGSPTVTEDNWKGVQGSKYIKMSAPWDAMPINQETAEQAYESVLADVGASLPRRDDIDNRIVSDVRNGTATLGQNGYLACPEDTILPELYSAPAPIDSDSDGMPDDWELANGLNPNNASDRNNTDSIGYTMLENYINSLDSFPDSDSPSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSTGSTSSSSSSSSSSSSSSSSSNSSSSSSGGGASLIIQEDDASFVSVDGSVDSNNPGFTGSGFANTENASGNGIEWLVSVPETSNYTFTIRYANGSSTNRTAKIDVDGDTVIENWDYDTTESWSNWGTTSIAVPLSSGSHLIRMEATNSSGLANIDYLAVEGAEGSGNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGSPISDELVLQEDATGFCDVDGTVDSNNAGFTGNGFANTENANGRTISWLVDAVYESTYGIEFRYASGSSNSRTATVYVNGNAQDTIDFSTTGSWTSWTIDMADVNLRSGLNDIVLQADTNEGLPNIDSLTIQGADITAADCDSIQPTPTPAPEATPTPVPDVTPTPTLSATPDCNSITDQEIIQVAADGSGQFSTLKSAMESLSTSNSNPVQIRVKPGIYDEKITFDRPNVTVCGEPGQAAQTIITHKENGTSTGFTIKITSDDVSFENMTVRNTETDGQAPALMITGDRIQFRNSQVLGYQDTLYARDGTSYFRDTLIEGRVDYIFGHGTSVYENCEIRTVESGSAMAAPATPASREWGLVFLGGKLTATSNIKDGSQWLARSWGAEGFTAFIGVELGAHIKGEGWGTMSQTEGKLDQARFYEYNSTGPGANPGARASEVAPQLTNAEAAEYTIENIFGSWTPSFSL
|
A0A1Y6CFA2
IPR000070