| Protein name |
DNA polymerase (EC 2.7.7.7)
|
| Main knot |
Unknown (76%)
|
| Global pLDDT |
81.5
|
| Species |
Thermococcus sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A218PAH5
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A218PAH5: L0
|
| Model length |
1134
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
76.3 | 388-919 | 532 | 1-387, 920-1134 | 387 | 215 |
|
Model Sequence |
MILDVDYVTEDGKPVIRIFRKENGEFRIDYDRDFEPYIYALVEDDSAVDEVKSITAERHGKMVGIKRVEKVRRKFLGRPIEVWKLVFEHPQDVPAIRDIIRNHPAVREIYEYDIPFAKRYLIDKGLVPMEGNEELRMMAFDIETLYHEGDEFGEGEILMISYADESGARVITWKKIDLPYVEVVSTEKEMIKRFLRLVKEKDPDVLVTYNGDNFDFAYIKKRAEKLGLKFILGRDSSEPKIQRMGDRFAVKVKGRIHFDLYPVIRRTLNLPTYTLEAVYEAIFGKPKEKVYAEEIATAWETGEGLERVARYSMEDAKTTYELGREFFPMEVELAKLVGQSVWDVSRSSTGNLVEWYLLREAYERNELAPNKPDAEEYKKRLRSTYLGGYVKEPEKGLWEGIAYLDFRCHPADTKVIVKGRGPVNISEVREGDYVLGINGWQRVKKVWEYDYRGELIKINGLRCTPNHRIPVVTKNERQTRIRDSLASSFLTHRVKGRIIMTPLFQRVGDLESASVDEEEILKGELVGILLAEGTLLRKDVEYFDSSRAKRRVSHQYRVEITIGAHEKEFLDRITYIFEKLFGVTPSVVRKGKTNGIAIRVAKKRVYLEIEKLMNNIENLHAPSIIRGFSEGDGTVNRVRRSVVISQGGDNRWKLELISKLLDKLGIPYSTYEYQYTENGKRLTRHILEITGRDGLILFQIFAGFISSRKKEMLREAIQNREMKGLENNSFYRLSDFAVEKEYYEGKVYDLTLEGSPYYFANGVLTHNSLYPSIIVTHNVSPDTLERECKNYHVAPVVGYRFCGDFKGFIPSILEELIETRQRVKRKMKATIDPVERKMLDYRQRALKILANSYYGYMGYPKARWYSKECAESVTAWGRHYIETTIKEAEGFGFKVLYADTDGFFATIPGEKPEVIKKRALEFLKHINKKLPGMLELEYEGFYMRGFFVTKKKYALIDEEGHITTRGLEVVRRDWSEIAKETQAKVLEAILKHGDVEEAVRIVREVTEKLSKYEIPPEKLVIHEQITRELKDYKATGPHVAIAKRLAERGVKIRPGTVISYIVLRGSGRIGDRAIPFEEFDPVKHKYDADYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLGAWLKRGKKG
|
| Domain |
Archaea
|
| Family |
Thermococcaceae
|
| Species (Full Name) |
Thermococcus sp. P6
|
| Gene |
A3L12_00345
|
| PFAM codes |
PF00136, PF03104, PF14528
|
| InterPro codes |
 IPR003586, IPR003587, IPR004042, IPR004860, IPR006133, IPR006134, IPR006141, IPR006142, IPR006172, IPR012337, IPR017964, IPR023211, IPR027434, IPR030934, IPR036397, IPR036844, IPR042087, IPR043502
|
| PDB structures (whole Protein) |
-
|
A0A218PAH5