A0A218XVN6F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (74%)
Global pLDDT
93.1
Species
Pomegranate
UniProt
Structure Prediction Model
AlphaFold v4:  A0A218XVN6
PDB structures
-
Model length
236
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.0 17-227 211 1-16, 228-236 16 9
Model Sequence
MATVPDSSSSKRWLPLEANPDVMNQFLWGLGLPENEAECFDVFGLDEELLEMVPKPVLAVLFLYPLTSLSEEERMQQDKVQREYSNKVYFMKQTVGNACGTIGLLHAVGNITSEVNLVEGSYLDKFFKSTSSMDPHQRAAFLENDRDMEVAHSVAATAGDTEASDNVDTHFICFSCVDGELYELDGRKSCPISHGPSSPSTLLQDAAKVIRGMIEKNPESLNFNVIAVSKKAGGNF
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (58%)
Global pLDDT
91.53
Species
Pomegranate
UniProt
Structure Prediction Model
PDB structures
-
Model length
236
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
83.8 16-226 211 1-15, 227-236 15 10
Model Sequence
MATVPDSSSSKRWLPLEANPDVMNQFLWGLGLPENEAECFDVFGLDEELLEMVPKPVLAVLFLYPLTSLSEEERMQQDKVQREYSNKVYFMKQTVGNACGTIGLLHAVGNITSEVNLVEGSYLDKFFKSTSSMDPHQRAAFLENDRDMEVAHSVAATAGDTEASDNVDTHFICFSCVDGELYELDGRKSCPISHGPSSPSTLLQDAAKVIRGMIEKNPESLNFNVIAVSKKAGGNF
Comments
Domain Eukaryota
Family Lythraceae
Species (Full Name) Punica granatum (Pomegranate)
Gene LOC116204857 CDL15_Pgr003754 CRG98_038032
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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