A0A223YVU6F1

RNA-binding protein
AF4
Categories voted by users:
Information
Protein name
RNA-binding protein
Main knot
31 (84%)
Global pLDDT
93.08
Species
Methanothermobacter sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A223YVU6
PDB structures
-
Model length
263
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.1 2-229 228 1-1, 230-263 1 34
Model Sequence
MSIFIPDSLTAETGDLKIKTYKVGLIARAASIFGVKRIVIYHDDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRVKKGTLVDIGADKLALCREKLTVNRIMSFRVVRLGKEILIEPDEPDDRYWGYEVLDTRRNLAESLKTLGADVVVATSRKASPITSILDEVKTRMRGAREAAILFGGPYKGLPEIDADIWVNTLPGQCTETVRTEEAVLATLSVFNMLTQIDEKDE
Comments
ESM1
Categories voted by users:
Information
Protein name
RNA-binding protein
Main knot
31 (83%)
Global pLDDT
90.59
Species
Methanothermobacter sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
263
ESM generation time
AlphaKnot deposition date
2023-06-28
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.8 2-229 228 1-1, 230-263 1 34
Model Sequence
MSIFIPDSLTAETGDLKIKTYKVGLIARAASIFGVKRIVIYHDDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRVKKGTLVDIGADKLALCREKLTVNRIMSFRVVRLGKEILIEPDEPDDRYWGYEVLDTRRNLAESLKTLGADVVVATSRKASPITSILDEVKTRMRGAREAAILFGGPYKGLPEIDADIWVNTLPGQCTETVRTEEAVLATLSVFNMLTQIDEKDE
Comments
Domain Archaea
Family Methanobacteriaceae
Species (Full Name) Methanothermobacter sp. EMTCatA1
Gene tca_00001
PFAM codes  PF02598
InterPro codes  IPR003750,  IPR012340,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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