A0A226MD67 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (63%)
Global pLDDT	77.22
Species	Scaled quail
UniProt	A0A226MD67
Structure Prediction Model	AlphaFold v4: A0A226MD67
PDB structures	-
Model length	322
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.8	75-304	230	1-74, 305-322	74	18

Model Sequence

CSLESWRIHSPSTMGERTDCAKSHTSLAEYSPVSKSDKTDPNDHSEIQDGNQNTMQLKKEISLLNGISLIVGNMIGSGIFVSPKGVLIYSKSYGLSLVIWAIGGIFSVFGALCYAELGTTITKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAVIAITFANYIVQPFFPSCDPPYIACRLIAAACECLLTFVNCAYVKWGTRVQDVFTYAKVAALIAIIVTGIVKICQGYSSHFQNSFEGSSVDIGDISLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIAVSMPIVTVIYIMTNVAYYTVLDVQAVLSSDAVAV

Comments

ESM1

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (57%)
Global pLDDT	89.59
Species	Scaled quail
UniProt	A0A226MD67
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	322
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					71.4	75-304	230	1-74, 305-322	74	18

Model Sequence

Comments

Domain	Eukaryota
Family	Odontophoridae
Species (Full Name)	Callipepla squamata (Scaled quail)
Gene	ASZ78_002561
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A226MD67F1

AF4

Model Sequence

ESM1

Model Sequence