A0A232LMQ6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)
Main knot	3₁ (96%)
Global pLDDT	72.09
Species	Elaphomyces granulatus
UniProt	A0A232LMQ6
Structure Prediction Model	AlphaFold v4: A0A232LMQ6
PDB structures	-
Model length	375
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.8	78-125	48	1-77, 126-375	77	250

Model Sequence

MVRHKKDKFSARSKKFSAPRRDNEDNQDEDTITTKRPPFKAACWDLGHCDPKRCSGKRLMRFGLMRELQIGNRYPGVIISPNAKSVLSPADRELLEQHGAAVVECSWARVKEVPWSRIGGKCERLLPYLIAANSVNYGRPWRLNCAEALTACFYICGHENWAIEVLKHFSYGDAFLEINAQLLKRYAACANENEIKKTEDEWLTRLEREYAESRAERDASGVEGIWARGNTNRMGSDDSPSDKGDGEAAEKADEDEDEDEDEDGAEKDPYAISDDSEDEEQMAEIRRKILNSKAFQTPTEPEKPALEKITRPEPLPVDSDAESGTGGSEDDMFDKIIDATPVTDRTGIIAIQRLKGRDAITASLSRTITSSPKRR

Comments

ESM1

Categories voted by users:

Information

Protein name	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)
Main knot	3₁ (93%)
Global pLDDT	68.13
Species	Elaphomyces granulatus
UniProt	A0A232LMQ6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	375
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					60.8	78-125	48	1-77, 126-375	77	250

Model Sequence

Comments

Domain	Eukaryota
Family	Elaphomycetaceae
Species (Full Name)	Elaphomyces granulatus
Gene	TSR3 Egran_06792
PFAM codes	PF04034, PF04068
InterPro codes	IPR007177, IPR007209, IPR022968
PDB structures (whole Protein)	-

A0A232LMQ6F1

AF4

Model Sequence

ESM1

Model Sequence