A0A239PSS6 | AlphaKnot 2.0

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Information

Protein name	PepSY domain-containing protein
Main knot	5₁ (91%)
Global pLDDT	89.17
Species	Amphiplicatus metriothermophilus
UniProt	A0A239PSS6
Structure Prediction Model	AlphaFold v6: A0A239PSS6
PDB structures	-
Structure in AlphaLasso	A0A239PSS6: LS_2++C
Model length	105
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.87	38-95	58	1-37, 96-105	37	10		Knot
					97.86	50-83	34	1-49, 84-105	49	22		Knot

MMRFAIAATALALWAGAAHAEKIGPDCTLKGLPLRGDVQVVDSFPDLKVQIVESFPDLKVKAVESFPDDCGEWRFVDSFPDFKIQYVDSFPDLTIRFVESFPGLP

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Categories voted by users:

Information

Protein name	PepSY domain-containing protein
Main knot	5₁ (92%)
Global pLDDT	89.91
Species	Amphiplicatus metriothermophilus
UniProt	A0A239PSS6
Structure Prediction Model	AlphaFold v4: A0A239PSS6
PDB structures	-
Structure in AlphaLasso	A0A239PSS6: LS_2++C
Model length	105
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.9	38-95	58	1-37, 96-105	37	10

MMRFAIAATALALWAGAAHAEKIGPDCTLKGLPLRGDVQVVDSFPDLKVQIVESFPDLKVKAVESFPDDCGEWRFVDSFPDFKIQYVDSFPDLTIRFVESFPGLP

Comments

Categories voted by users:

Information

Protein name	PepSY domain-containing protein
Main knot	0₁ (93%)
Species	Amphiplicatus metriothermophilus
UniProt	A0A239PSS6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A239PSS6: LS_2++C
Model length	105
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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MMRFAIAATALALWAGAAHAEKIGPDCTLKGLPLRGDVQVVDSFPDLKVQIVESFPDLKVKAVESFPDDCGEWRFVDSFPDFKIQYVDSFPDLTIRFVESFPGLP

Comments

Domain	Bacteria
Family	Parvularculaceae
Species (Full Name)	Amphiplicatus metriothermophilus
Gene	SAMN06297382_1739
PDB structures (whole Protein)	-

A0A239PSS6F1