| Protein name |
OPT family oligopeptide transporter
|
| Main knot |
52 (76%)
|
| Global pLDDT |
87.02
|
| Species |
Variovorax boronicumulans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A250DUG2
|
| PDB structures |
-
|
| Model length |
549
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.6 | 101-530 | 430 | 1-100, 531-549 | 100 | 19 |
|
Model Sequence |
MTAAAPLEDKGAGHTALPPAALHPKALAPANLILTVVLSVFGAIVGIQMLASLGITPSTSLIGALAAMTLARVPLAMFRGFRSVHAQNLAQTSISSATFGAANSLFLPIGIPFLFGLPQMVVPMLIGVSLAMLLDAWLLYRMFDTPAFPAKNPWPLGIAAAEAIKAGDGGGKQAWLLLGGLATGVAGAVFKLPMSAFGVALIGGLGAMTAFGIGLLVRGYSAPLFGFDIGTRYVPHGMMIGAGLVALVQVARVVLKKHGRAADTDSTAATTEALAEARGASVLGRSLKLGGAGYLAIMVLLCAGTGIYTGMSPGMLALFIVYGTFAAFVHELIVGIAAMHSGWFPAFAVALISLLLGILIGFPPEALVVLAGFSAATGPAFADMGYDLKAGHLLRGEASGSAFELEGRREQMIAGMVGFGVAIVVVACAYPLFFANHQTAPINAAYVAAIKAGISGETARNLALWAVPGALLQLAGGPRQQLGVLFATGLLIASPMAGWMVAAGIACRLAAHGVLGAAARERLEVFAGGVIAGDALYSFFSGAVKSLRK
|
A0A250DUG2
IPR004813