A0A257CIX7 | AlphaKnot 2.0

AF4

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Information

Protein name	Polysaccharide biosynthesis protein GumN
Main knot	3₁ (78%)
Global pLDDT	84.39
Species	Burkholderiales bacterium
UniProt	A0A257CIX7
Structure Prediction Model	AlphaFold v4: A0A257CIX7
PDB structures	-
Structure in AlphaLasso	A0A257CIX7: LL_+1,-2
Model length	348
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					83.7	30-205	176	1-29, 206-348	29	143

Model Sequence

MSIHTSFTALLGLRGLRASRRLAIWSLLSLSLAGHTAQAADEPVAAASTAAPAASEPARVCPPAPVPPDVAQMQQGMRDAVDRGFLWKVSRNGRSSWLYGTLHAAKIDWVYPGPAVQQALRDSDVVALEIDVLDPGVAKRLETAVKMPAKPAALPPELAARLATQARLACVDDALAGLRPEMQAVTLSVLVARDEGIDPSWGVDGFLAGYARGLQKPVISLETPELQMALLVSNKPADTARSVAEVLTELESGETRRTLLRLARAWAASEFSELETYAQWCNCVKTAEQKRFYAQLLDGRNGPMARRIADAHQRGQRVFAAVGALHMVGPKSLPALLAAQGFQVERVR

Comments

ESM1

Categories voted by users:

Information

Protein name	Polysaccharide biosynthesis protein GumN
Main knot	5₂ (63%)
Global pLDDT	86.38
Species	Burkholderiales bacterium
UniProt	A0A257CIX7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A257CIX7: LL_+1,-2
Model length	348
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					49.9	26-251	226	1-25, 252-348	25	97

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Burkholderiales
Species (Full Name)	Burkholderiales bacterium PBB6
Gene	CFE46_02560
PFAM codes	PF01963
InterPro codes	IPR002816
PDB structures (whole Protein)	-

A0A257CIX7F1

AF4

Model Sequence

ESM1

Model Sequence