A0A258JGL8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (53%)
Global pLDDT	87.17
Species	Brevundimonas sp
UniProt	A0A258JGL8
Structure Prediction Model	AlphaFold v4: A0A258JGL8
PDB structures	-
Model length	328
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.2	37-287	251	1-36, 288-328	36	41

Model Sequence

MWRVKSLDAILATAEKKSLHRSLGPIQLTLLGIGAIIGTGIFVLTAAASQKAGPGMMVSFVIAGAVCAVAALCYSELAAMAPVSGSAYTYTYAVMGELLAWCVGWALILEYAVAAAAVSVGWSGYVLGLIEQGLGFDFPDLLSAGPTWAMNGFIPMPDFSAGIVNIPAIVVALLVTGLLMLGTTESARVNAVLVLIKVAALTVFIVITLPVIKTANLSPFAPNGLFGASSGMGIVGAAASIFFAYVGFDAVSTAAEETKNPQRNVPIGLIGSLAICTVFYLLVALGAAGAIGAQPVLGAAGEAVQPGSPAFVAACALPANAEALVCSN

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (62%)
Global pLDDT	84.13
Species	Brevundimonas sp
UniProt	A0A258JGL8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	328
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.3	37-287	251	1-36, 288-328	36	41

Model Sequence

Comments

Domain	Bacteria
Family	Caulobacteraceae
Species (Full Name)	Brevundimonas sp. 32-68-21
Gene	B7Y85_07695
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A258JGL8F1

AF4

Model Sequence

ESM1

Model Sequence