A0A258LJH3 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Sodium-dependent transporter
Main knot	4₁ (59%)
Global pLDDT	90.2
Species	Mehylophilales bacterium
UniProt	A0A258LJH3
Structure Prediction Model	AlphaFold v4: A0A258LJH3
PDB structures	-
Model length	302
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.5	23-273	251	1-22, 274-302	22	29

Model Sequence

MTQHRGAWRNRWTFMLATAGSAIGLGNIWKLPYMIGVNGGSAFVLVFIACILFVGIPLMMTEVLLGRRAQQNPLDGIKTLALEAKASPLWKIIGGMGMLTGLLILAFYSVIGGWVLSFILEAAKGSFTEITATQSTANFNKLRASPISLLFWHSVFMCLTMGVVAHGVNSGLEKANNILIPALFAILLILLGYSMSVGNMPAAYDFMFSLDFSKITPVAVLSALGHAFFSLSLGMGSVMVYGSYLQRNVSIARTTIYIALADTMLGLLVGLAIYSLVFANNLAPNAGPGLIFQTLPIAFGHM

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium-dependent transporter
Main knot	4₁ (64%)
Global pLDDT	93.39
Species	Mehylophilales bacterium
UniProt	A0A258LJH3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	302
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.9	24-292	269	1-23, 293-302	23	10

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Nitrosomonadales
Species (Full Name)	Mehylophilales bacterium 35-46-6
Gene	B7Y72_02950
PFAM codes	PF00209
InterPro codes	IPR000175, IPR037272
PDB structures (whole Protein)	-

A0A258LJH3F1

AF4

Model Sequence

ESM1

Model Sequence