A0A258NAB9 | AlphaKnot 2.0

AF4

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Information

Protein name	rRNA methyltransferase
Main knot	3₁ (78%)
Global pLDDT	90.97
Species	Acidovorax sp
UniProt	A0A258NAB9
Structure Prediction Model	AlphaFold v4: A0A258NAB9
PDB structures	-
Model length	263
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.3	77-152	76	1-76, 153-263	76	111

Model Sequence

MRTRFILIQTSHAGNVGAAARAMKTMGFDDLVLVAPRWPNVLRREETIQRASGALDVLENARIVASLDEALDGMSHLCATAMTPRDFGPPAASPRAHFEMLLKKELLALDGKGLEVKNASNIEAPAAETGVAFLFGSERFGMANEDVYRCHVALSIPTNPGFGSLNLGAAIQVIAYEWRQALGGFAVQDATPTRAQADAAQVAGMLAHWEQALAGIGFLDPAAPKKLMPRLNQLFNRAQLSPEEIHILRGVAKAMLETAQAKR

Comments

ESM1

Categories voted by users:

Information

Protein name	rRNA methyltransferase
Main knot	3₁ (77%)
Global pLDDT	89.08
Species	Acidovorax sp
UniProt	A0A258NAB9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	263
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.2	1-215	215	216-263	0	48

Model Sequence

Comments

Domain	Bacteria
Family	Comamonadaceae
Species (Full Name)	Acidovorax sp. 35-64-16
Gene	B7Y64_12735
PFAM codes	PF00588
InterPro codes	IPR001537, IPR004384, IPR029026, IPR029028
PDB structures (whole Protein)	-

A0A258NAB9F1

AF4

Model Sequence

ESM1

Model Sequence