A0A259LP13F1

TraB/GumN family protein
AF6
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (52%)
Global pLDDT
85.51
Species
Hyphomonas sp
UniProt
Structure Prediction Model
AlphaFold v6:  A0A259LP13
PDB structures
-
Structure in AlphaLasso
  A0A259LP13: LL+1,-1
Model length
340
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.93 8-275 268 1-7, 276-340 7 65 Knot
86.59 22-214 193 1-21, 215-340 21 126 Knot
Model Sequence
MNLPFARSLLAGCAALLLIACDPAVTDANVTEESAAPVPEACDTSRRAELRNARPELEAAALEAAKASRGGGSPALWTMGDEDTTIHLLGTVHLLRPELDWMSPEIEAAIASADTVVFEADTTSPEAQRELMKFYTTQGFFTDGGQLTNFLSESETAELKAALEIVGLPIEALLPHRPWMAAVNISVTQMLDEGFDPEAGVEKVIERAALEQGASFEYLETVEQQLGGLAGLSYCDQVDFLMATVDGIDEGVGALDLLVDEWADGDVAGIGALMANPEMLGSQPIYDVMMTDRNARWVPQITAMLDAPGTVLIAVGAGHLAGEDSVVEMLREAGYTVEGP
Comments
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (57%)
Global pLDDT
85.95
Species
Hyphomonas sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A259LP13
PDB structures
-
Structure in AlphaLasso
  A0A259LP13: LL+1,-1
Model length
340
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.9 14-317 304 1-13, 318-340 13 23
Model Sequence
MNLPFARSLLAGCAALLLIACDPAVTDANVTEESAAPVPEACDTSRRAELRNARPELEAAALEAAKASRGGGSPALWTMGDEDTTIHLLGTVHLLRPELDWMSPEIEAAIASADTVVFEADTTSPEAQRELMKFYTTQGFFTDGGQLTNFLSESETAELKAALEIVGLPIEALLPHRPWMAAVNISVTQMLDEGFDPEAGVEKVIERAALEQGASFEYLETVEQQLGGLAGLSYCDQVDFLMATVDGIDEGVGALDLLVDEWADGDVAGIGALMANPEMLGSQPIYDVMMTDRNARWVPQITAMLDAPGTVLIAVGAGHLAGEDSVVEMLREAGYTVEGP
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (47%)
Global pLDDT
87.64
Species
Hyphomonas sp
UniProt
Structure Prediction Model
PDB structures
-
Structure in AlphaLasso
  A0A259LP13: LL+1,-1
Model length
340
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
58.1 10-265 256 1-9, 266-340 9 75
Model Sequence
MNLPFARSLLAGCAALLLIACDPAVTDANVTEESAAPVPEACDTSRRAELRNARPELEAAALEAAKASRGGGSPALWTMGDEDTTIHLLGTVHLLRPELDWMSPEIEAAIASADTVVFEADTTSPEAQRELMKFYTTQGFFTDGGQLTNFLSESETAELKAALEIVGLPIEALLPHRPWMAAVNISVTQMLDEGFDPEAGVEKVIERAALEQGASFEYLETVEQQLGGLAGLSYCDQVDFLMATVDGIDEGVGALDLLVDEWADGDVAGIGALMANPEMLGSQPIYDVMMTDRNARWVPQITAMLDAPGTVLIAVGAGHLAGEDSVVEMLREAGYTVEGP
Comments
Domain Bacteria
Family Hyphomonadaceae
Species (Full Name) Hyphomonas sp. 34-62-18
Gene B7X53_15285
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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