| Protein name |
Integral membrane protein
|
| Main knot |
31 (52%)
|
| Global pLDDT |
79.53
|
| Species |
Rhodococcus sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A260ADM2
|
| PDB structures |
-
|
| Model length |
310
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
82.8 | 25-195 | 171 | 1-24, 196-310 | 24 | 115 |
|
Model Sequence |
MPAFVEHDTLTVACPEVHPEATMQMTFQRTLRVPDDGAEYNLPPGLGSFPLRQNDSADGALMPMWQSEACWIDFSGHYPFLLTIAAGSINVVTGSPWSASPNFEEEDYFEVPEQPWLDGFNVGEGTVRQFVAMPLGDGYTVEEQLSADPAIGGIHIAAYPLKASVWDAQPPRHNIPDFIVCAAPASDMGLGGGGSIRQTIASPLRQHDDWDLEHGIEFTVDIANSDVWQQLTGEAPPTMPPSAADYTRAGLPWFLWYNDFAGARGGSAELANTKSIKEYGTAHGTEPWSEDESFDEPMPTVLSGQHTPKG
|
| Protein name |
Integral membrane protein
|
| Main knot |
946 (70%)
|
| Global pLDDT |
65.25
|
| Species |
Rhodococcus sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
310
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.3 | 84-202 | 119 | 1-83, 203-310 | 83 | 108 |
|
Model Sequence |
MPAFVEHDTLTVACPEVHPEATMQMTFQRTLRVPDDGAEYNLPPGLGSFPLRQNDSADGALMPMWQSEACWIDFSGHYPFLLTIAAGSINVVTGSPWSASPNFEEEDYFEVPEQPWLDGFNVGEGTVRQFVAMPLGDGYTVEEQLSADPAIGGIHIAAYPLKASVWDAQPPRHNIPDFIVCAAPASDMGLGGGGSIRQTIASPLRQHDDWDLEHGIEFTVDIANSDVWQQLTGEAPPTMPPSAADYTRAGLPWFLWYNDFAGARGGSAELANTKSIKEYGTAHGTEPWSEDESFDEPMPTVLSGQHTPKG
|
| Domain |
Bacteria
|
| Family |
Nocardiaceae
|
| Species (Full Name) |
Rhodococcus sp. 06-412-2C
|
| Gene |
CH254_09485
|
| PDB structures (whole Protein) |
-
|
A0A260ADM2