| Protein name |
Amino acid permease
|
| Main knot |
41 (78%)
|
| Global pLDDT |
86.47
|
| Species |
Candidatus Hydrogenedentes
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2A5DJD4
|
| PDB structures |
-
|
| Model length |
298
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.4 | 26-268 | 243 | 1-25, 269-298 | 25 | 30 |
|
Model Sequence |
MSEPSEGLFRHIGLRSATGLVVASMIGAGIFTTTGFQAADLGHPGYIFLLWVVGGVLAFCGALCFAELGAAMPHAGAEYVYIRETYGSTIAFMSAFVALFAGFSAPIAAALKSLMAYMGYFVPLFAENPLLFAGLHVNDAVAITLVWGLVAIHCGGVKGGIGFNDAITAFKVGGIVLIIAAAFIVGRGSLSNLTEVAPQFYSMSSPDRMSAFATSLIFVSFCYLGWNGSAYMAAEMKDPQRVLPRSLLIGTVVVTVLYFLLNLMYFYGAGVSGRPWADCSGRTHARGNAWARSPARTR
|
| Protein name |
Amino acid permease
|
| Main knot |
41 (74%)
|
| Global pLDDT |
87.63
|
| Species |
Candidatus Hydrogenedentes
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
298
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
89.6 | 26-265 | 240 | 1-25, 266-298 | 25 | 33 |
|
Model Sequence |
MSEPSEGLFRHIGLRSATGLVVASMIGAGIFTTTGFQAADLGHPGYIFLLWVVGGVLAFCGALCFAELGAAMPHAGAEYVYIRETYGSTIAFMSAFVALFAGFSAPIAAALKSLMAYMGYFVPLFAENPLLFAGLHVNDAVAITLVWGLVAIHCGGVKGGIGFNDAITAFKVGGIVLIIAAAFIVGRGSLSNLTEVAPQFYSMSSPDRMSAFATSLIFVSFCYLGWNGSAYMAAEMKDPQRVLPRSLLIGTVVVTVLYFLLNLMYFYGAGVSGRPWADCSGRTHARGNAWARSPARTR
|
A0A2A5DJD4
IPR002293