A0A2A5P0R0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA-binding protein
Main knot	3₁ (89%)
Global pLDDT	93.14
Species	Candidatus Geothermarchaeota
UniProt	A0A2A5P0R0
Structure Prediction Model	AlphaFold v4: A0A2A5P0R0
PDB structures	-
Model length	329
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.5	251-299	49	1-250, 300-329	250	30

Model Sequence

MEVLPGAKVVPRPQGFKGLVAVYSDNPRRDAEEIKAKVLEAEHVIPADAVVEARLGKIVEAARSVVQGRIGRDETFAVRTVRRGRHDYTSIDVNVKVGAAVKEATGAGVNLDYPDKIVCVEIIGDTAIISVLPGSEEYKKMRPGKKPILKYLHRIALVQMPYLGPLDAAYNMGVRVGREAQNFEVKELVIAPIGLTPADQLQKFIEGVYQGIESRYAVQKKIYARPVKRVPVYVEDLYQLVRDRFDEPIIIFEPEGEPVIKMAREIFEVFEGGHGRINILVGSREGTPVGLYRFARMVLDIAPEVTISTDLAAASAITALITVLEGERP

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA-binding protein
Main knot	3₁ (89%)
Global pLDDT	90.0
Species	Candidatus Geothermarchaeota
UniProt	A0A2A5P0R0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	329
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.2	251-299	49	1-250, 300-329	250	30

Model Sequence

Comments

Domain	Archaea
Family	TACK group
Species (Full Name)	Candidatus Geothermarchaeota archaeon ex4572_27
Gene	B6U99_01040
PFAM codes	PF02926, PF14419
InterPro codes	IPR004114, IPR025849, IPR029028
PDB structures (whole Protein)	-

A0A2A5P0R0F1

AF4

Model Sequence

ESM1

Model Sequence