A0A2D4K6X4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (87%)
Global pLDDT	75.67
Species	Micrurus paraensis
UniProt	A0A2D4K6X4
Structure Prediction Model	AlphaFold v4: A0A2D4K6X4
PDB structures	-
Model length	385
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.3	55-267	213	1-54, 268-385	54	118

Model Sequence

WEKGARLAQRGGTRDKRGRPHWSLFRGVRAIESEARHCGGFLGAMAGGGSAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTLFFAKQVINNACATQAIVSVLLNCTHQDIHLGETLSEFKEFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSTAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGVCNQDDWINAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKITDLQRQLAEEEPMDTDQSSNILSSVQSEVAKYQMLIDEENQKLKRYKGAVQADLCSKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQEAK

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (85%)
Global pLDDT	79.39
Species	Micrurus paraensis
UniProt	A0A2D4K6X4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	385
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					45.3	56-267	212	1-55, 268-385	55	118

Model Sequence

Comments

Domain	Eukaryota
Family	Elapidae
Species (Full Name)	Micrurus paraensis
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR033837, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A2D4K6X4F1

AF4

Model Sequence

ESM1

Model Sequence