| Protein name |
Conserved domain protein
|
| Main knot |
31 (59%)
|
| Global pLDDT |
80.51
|
| Species |
Oceanospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2D5PJD4
|
| PDB structures |
-
|
| Model length |
221
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.0 | 3-107 | 105 | 1-2, 108-221 | 2 | 114 |
|
Model Sequence |
MITVHATKKLLAKQPARKDSVTENSGTAAPGKLGSWHANLLTIQRRNCLLFVHDRTRFPVFIPALTKADMANIDRWFEDSLMNTLLKCQATQEQLDTAAALLQPLSFEGGTDRSILGTMNQIGQDLEHTIYFDSINVADMTGYQMSAWLAERPCTVKSQKEFILPKQAFLDFIDEIYPGNKSGRAPGRSEQTLQSALQSVSQPTVPDNVVMLDLFRNDKDD
|
| Protein name |
Conserved domain protein
|
| Main knot |
31 (59%)
|
| Global pLDDT |
83.54
|
| Species |
Oceanospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
221
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
89.6 | 2-107 | 106 | 1-1, 108-221 | 1 | 114 |
|
Model Sequence |
MITVHATKKLLAKQPARKDSVTENSGTAAPGKLGSWHANLLTIQRRNCLLFVHDRTRFPVFIPALTKADMANIDRWFEDSLMNTLLKCQATQEQLDTAAALLQPLSFEGGTDRSILGTMNQIGQDLEHTIYFDSINVADMTGYQMSAWLAERPCTVKSQKEFILPKQAFLDFIDEIYPGNKSGRAPGRSEQTLQSALQSVSQPTVPDNVVMLDLFRNDKDD
|
| Domain |
Bacteria
|
| Family |
Oceanospirillaceae
|
| Species (Full Name) |
Oceanospirillaceae bacterium
|
| Gene |
CMH98_17440
|
| PDB structures (whole Protein) |
-
|
A0A2D5PJD4