A0A2D7FW02 | AlphaKnot 2.0

AF4

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Information

Protein name	LUD_dom domain-containing protein
Main knot	3₁ (84%)
Global pLDDT	83.71
Species	Gammaproteobacteria bacterium
UniProt	A0A2D7FW02
Structure Prediction Model	AlphaFold v4: A0A2D7FW02
PDB structures	-
Structure in AlphaLasso	A0A2D7FW02: L₀
Model length	312
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.2	207-307	101	1-206, 308-312	206	5

Model Sequence

MKRILLLGLLVIQTASANELSMMTAEGFGFSDATRFSEAQARLMALRAAKIDAQRNLLEVINGVRVTAGTTVKDMTLESDIIGTRVKGMLQGAFETASDVTLQDGNWVASVTMAVCMDKTALECRAKPTLAAITQPSLVVTPEEDRFGVADLPPAAVAVVQTEVAVPVAAMVEDTADVEVTNADSTAIATVASEGNVALQNSRVTGLILDASALNYTPMLDVRVRTQRGKELYGPGHVPMGSDWLHWAPSLESAQNMEEIIGESPIVIVPEALGEATELVVNDADAIALFTSNTLNQDFLASGKVIIVVSGS

Comments

ESM1

Categories voted by users:

Information

Protein name	LUD_dom domain-containing protein
Main knot	3₁ (82%)
Global pLDDT	80.46
Species	Gammaproteobacteria bacterium
UniProt	A0A2D7FW02
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A2D7FW02: L₀
Model length	312
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.1	207-307	101	1-206, 308-312	206	5

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Gammaproteobacteria
Species (Full Name)	Gammaproteobacteria bacterium
Gene	CMP96_02130
PDB structures (whole Protein)	-

A0A2D7FW02F1

AF4

Model Sequence

ESM1

Model Sequence