| Protein name |
Heme oxygenase
|
| Main knot |
61 (50%)
|
| Global pLDDT |
91.1
|
| Species |
Nisaea sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
 A0A2D7Z6S2
|
| PDB structures |
-
|
| Model length |
276
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
91.34 | 64-270 | 207 | 1-63, 271-276 | 63 | 6 |
|
Knot |
Model Sequence |
MAADPIAAIPEAEATGDTAALFADIRATLGLPVVNLVWRHLATIPGGLPWTWDQVKPFYVSGAVERAAASFLAHQEMTAPFRPSPATLAAAGVTADDLPVIRAIIDSYHRGNAMNIIALTLPLSAASDSAPATLRPARLPVVADLAIPALPPLDGLPADHRQVVMELNAFGQRPGDPVVASMYRHLAPWPGLLALTAAMLAPVAGDGRLGTLIAGANTQADAHAAALRAEGGQIDGRQAPNGVPAALTRFTGDVIARMVPICGMLRAALAAEGDQG
|
| Protein name |
Heme oxygenase
|
| Main knot |
61 (47%)
|
| Global pLDDT |
91.42
|
| Species |
Nisaea sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A2D7Z6S2
|
| PDB structures |
-
|
| Model length |
276
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.1 | 70-262 | 193 | 1-69, 263-276 | 69 | 14 |
|
Model Sequence |
MAADPIAAIPEAEATGDTAALFADIRATLGLPVVNLVWRHLATIPGGLPWTWDQVKPFYVSGAVERAAASFLAHQEMTAPFRPSPATLAAAGVTADDLPVIRAIIDSYHRGNAMNIIALTLPLSAASDSAPATLRPARLPVVADLAIPALPPLDGLPADHRQVVMELNAFGQRPGDPVVASMYRHLAPWPGLLALTAAMLAPVAGDGRLGTLIAGANTQADAHAAALRAEGGQIDGRQAPNGVPAALTRFTGDVIARMVPICGMLRAALAAEGDQG
|
| Protein name |
Heme oxygenase
|
| Main knot |
61 (51%)
|
| Global pLDDT |
88.29
|
| Species |
Nisaea sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
276
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.2 | 60-262 | 203 | 1-59, 263-276 | 59 | 14 |
|
Model Sequence |
MAADPIAAIPEAEATGDTAALFADIRATLGLPVVNLVWRHLATIPGGLPWTWDQVKPFYVSGAVERAAASFLAHQEMTAPFRPSPATLAAAGVTADDLPVIRAIIDSYHRGNAMNIIALTLPLSAASDSAPATLRPARLPVVADLAIPALPPLDGLPADHRQVVMELNAFGQRPGDPVVASMYRHLAPWPGLLALTAAMLAPVAGDGRLGTLIAGANTQADAHAAALRAEGGQIDGRQAPNGVPAALTRFTGDVIARMVPICGMLRAALAAEGDQG
|
| Domain |
Bacteria
|
| Family |
Thalassobaculaceae
|
| Species (Full Name) |
Nisaea sp
|
| Gene |
CMH68_09510
|
| PDB structures (whole Protein) |
-
|
A0A2D7Z6S2