A0A2D7ZGM9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (62%)
Global pLDDT	94.91
Species	Phenylobacterium sp
UniProt	A0A2D7ZGM9
Structure Prediction Model	AlphaFold v4: A0A2D7ZGM9
PDB structures	-
Model length	262
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.6	196-237	42	1-195, 238-262	195	25

Model Sequence

MSGRTVTSLTNPTVKAVRALHQRKTRDETGLFVAEGLKNVTEGVETGHAPEILLYGRDAADHPLLQAAAQATHEAGGEVIEVTAEILAKVSRRDNPQAVVGVFPQVFTPLTALQPRLAKAWVALHRVRDPGNLGTIIRTADAAGCGGVVLVGECCDPYSVEAVRATMGSIFAVPIARAGEAEFAAWRRDWPGSVVGTLLSAEVDHRSADYVHPALILMGNEQQGLPPDMAGLCDVNVKIPMRGRADSLNLSVATGVMIYAAS

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (65%)
Global pLDDT	96.18
Species	Phenylobacterium sp
UniProt	A0A2D7ZGM9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	262
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.2	196-237	42	1-195, 238-262	195	25

Model Sequence

Comments

Domain	Bacteria
Family	Caulobacteraceae
Species (Full Name)	Phenylobacterium sp
Gene	CMJ17_02985
PFAM codes	PF00588
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A2D7ZGM9F1

AF4

Model Sequence

ESM1

Model Sequence