A0A2D8BSD1 | AlphaKnot 2.0

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Information

Protein name	DUF4377 domain-containing protein
Main knot	5₁ (90%)
Global pLDDT	90.63
Species	Maricaulis sp
UniProt	A0A2D8BSD1
Structure Prediction Model	AlphaFold v6: A0A2D8BSD1
PDB structures	-
Structure in AlphaLasso	A0A2D8BSD1: LS_2++C
Model length	98
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.2	33-87	55	1-32, 88-98	32	11		Knot
					97.33	43-77	35	1-42, 78-98	42	21		Knot

MITEAILIAALLDNPVSEACTFNGIPLYGEVEIVESFADIQVQVVDSFPDLRVKTVESFADSCGEWEFVDSFPDFTVEFVSSFGDIKIEFVESFPGRN

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Categories voted by users:

Information

Protein name	DUF4377 domain-containing protein
Main knot	5₁ (88%)
Global pLDDT	91.07
Species	Maricaulis sp
UniProt	A0A2D8BSD1
Structure Prediction Model	AlphaFold v4: A0A2D8BSD1
PDB structures	-
Structure in AlphaLasso	A0A2D8BSD1: LS_2++C
Model length	98
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.3	31-88	58	1-30, 89-98	30	10

MITEAILIAALLDNPVSEACTFNGIPLYGEVEIVESFADIQVQVVDSFPDLRVKTVESFADSCGEWEFVDSFPDFTVEFVSSFGDIKIEFVESFPGRN

Comments

Categories voted by users:

Information

Protein name	DUF4377 domain-containing protein
Main knot	0₁ (89%)
Species	Maricaulis sp
UniProt	A0A2D8BSD1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A2D8BSD1: LS_2++C
Model length	98
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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MITEAILIAALLDNPVSEACTFNGIPLYGEVEIVESFADIQVQVVDSFPDLRVKTVESFADSCGEWEFVDSFPDFTVEFVSSFGDIKIEFVESFPGRN

Comments

Domain	Bacteria
Family	Maricaulaceae
Species (Full Name)	Maricaulis sp
Gene	CMF74_05470
PDB structures (whole Protein)	-

A0A2D8BSD1F1