| Protein name |
Urease accessory protein UreF
|
| Main knot |
61 (44%)
|
| Global pLDDT |
92.33
|
| Species |
Gammaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2D9JMG8
|
| PDB structures |
-
|
| Model length |
270
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
91.9 | 44-260 | 217 | 1-43, 261-270 | 43 | 10 |
|
Model Sequence |
MTLAFIREHEAAGNVADTFADIKTTMRISTVNLIWRHLATNPPALEYAWARARPLYESPNLERSVARFGQALDDALPVLPRLPAAVLPALGITNVATLAATLDTYNRGNAYNLITLLALIEPPTTTAAGDAEESDLFRRPCTPVPDVPELDELDENTRALVLALNTLGTDGDDGGIVATLYKHAAHWPGYLGLAWSQLAPLAATGDLQRTIRETEHIGRLAARSLAGDRRNVEAPDAVHAAATDAINRFVRYAISRMVPIGQILRQSLPA
|
| Protein name |
Urease accessory protein UreF
|
| Main knot |
61 (36%)
|
| Global pLDDT |
90.0
|
| Species |
Gammaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
270
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.9 | 65-261 | 197 | 1-64, 262-270 | 64 | 9 |
|
Model Sequence |
MTLAFIREHEAAGNVADTFADIKTTMRISTVNLIWRHLATNPPALEYAWARARPLYESPNLERSVARFGQALDDALPVLPRLPAAVLPALGITNVATLAATLDTYNRGNAYNLITLLALIEPPTTTAAGDAEESDLFRRPCTPVPDVPELDELDENTRALVLALNTLGTDGDDGGIVATLYKHAAHWPGYLGLAWSQLAPLAATGDLQRTIRETEHIGRLAARSLAGDRRNVEAPDAVHAAATDAINRFVRYAISRMVPIGQILRQSLPA
|
| Domain |
Bacteria
|
| Family |
unclassified Gammaproteobacteria
|
| Species (Full Name) |
Gammaproteobacteria bacterium
|
| Gene |
CMQ61_06230
|
| InterPro codes |
 IPR029032
|
| PDB structures (whole Protein) |
-
|
A0A2D9JMG8