| Protein name |
Cytochrome P450
|
| Main knot |
61 (51%)
|
| Global pLDDT |
91.99
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
 A0A2E4GXW4
|
| PDB structures |
-
|
| Model length |
285
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
93.35 | 54-280 | 227 | 1-53, 281-285 | 53 | 5 |
|
Knot |
Model Sequence |
MSGQLISEVLEKDATGDIADIYAEIRRLWGVPNVTTIVRHVAAVSGALEWYWSIIGPANECGDFQETALSIFDTLATAPLIPLPEMALRAMGVDVSAQIEIENVFMAYDRNNRPNLLFVSVLQRLLKKSATADIYVPQRTGWEAPIEARPLVRMVQADEMAPEIMALAQTVGSWGFPEGTAFLPGVYRHLANWPAYLAHVGAVMWPYLETGEILRASMSIADAAGKAADELVSRLPVAGDGLPPPAPAQAEEMSAILSTMTQKIPEMIVICNLLGDALPAVKRNE
|
| Protein name |
Cytochrome P450
|
| Main knot |
61 (53%)
|
| Global pLDDT |
92.06
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A2E4GXW4
|
| PDB structures |
-
|
| Model length |
285
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.1 | 63-268 | 206 | 1-62, 269-285 | 62 | 17 |
|
Model Sequence |
MSGQLISEVLEKDATGDIADIYAEIRRLWGVPNVTTIVRHVAAVSGALEWYWSIIGPANECGDFQETALSIFDTLATAPLIPLPEMALRAMGVDVSAQIEIENVFMAYDRNNRPNLLFVSVLQRLLKKSATADIYVPQRTGWEAPIEARPLVRMVQADEMAPEIMALAQTVGSWGFPEGTAFLPGVYRHLANWPAYLAHVGAVMWPYLETGEILRASMSIADAAGKAADELVSRLPVAGDGLPPPAPAQAEEMSAILSTMTQKIPEMIVICNLLGDALPAVKRNE
|
| Protein name |
Cytochrome P450
|
| Main knot |
61 (53%)
|
| Global pLDDT |
86.04
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
285
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.6 | 64-271 | 208 | 1-63, 272-285 | 63 | 14 |
|
Model Sequence |
MSGQLISEVLEKDATGDIADIYAEIRRLWGVPNVTTIVRHVAAVSGALEWYWSIIGPANECGDFQETALSIFDTLATAPLIPLPEMALRAMGVDVSAQIEIENVFMAYDRNNRPNLLFVSVLQRLLKKSATADIYVPQRTGWEAPIEARPLVRMVQADEMAPEIMALAQTVGSWGFPEGTAFLPGVYRHLANWPAYLAHVGAVMWPYLETGEILRASMSIADAAGKAADELVSRLPVAGDGLPPPAPAQAEEMSAILSTMTQKIPEMIVICNLLGDALPAVKRNE
|
| Domain |
Bacteria
|
| Family |
Rhodospirillaceae
|
| Species (Full Name) |
Rhodospirillaceae bacterium
|
| Gene |
CMM35_03000
|
| PDB structures (whole Protein) |
-
|
A0A2E4GXW4