| Protein name |
Rab-GAP TBC domain-containing protein
|
| Main knot |
61 (56%)
|
| Global pLDDT |
90.68
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
 A0A2E4I6L3
|
| PDB structures |
-
|
| Model length |
274
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.65 | 57-271 | 215 | 1-56, 272-274 | 56 | 3 |
|
Knot |
Model Sequence |
MAEHGDDPVSAIAEEDAVGEVAEIFADIRATMDIPLLTSIWRTLVSVDGGLKSAWNAAKPLYQSGYPQAALASIVGSDRLPILERLVPGQLECAGVSAQALVQVRAIVAAYNRSNGMNMLALSCLVTEPSGPPLQKPEPSPSLTWPPLRRLLPKAEISPEVWKLLLAINRFGSVNGGGLATLWRHLAHWPGLLSVLQASFAPLHRAGRLEKSVCAVHELSQDLAARMACMKEGRAVIPEPALQMVENYVAIPGAVTRMVTLGHAVGNWLDQEVE
|
| Protein name |
Rab-GAP TBC domain-containing protein
|
| Main knot |
61 (50%)
|
| Global pLDDT |
90.95
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A2E4I6L3
|
| PDB structures |
-
|
| Model length |
274
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.5 | 68-262 | 195 | 1-67, 263-274 | 67 | 12 |
|
Model Sequence |
MAEHGDDPVSAIAEEDAVGEVAEIFADIRATMDIPLLTSIWRTLVSVDGGLKSAWNAAKPLYQSGYPQAALASIVGSDRLPILERLVPGQLECAGVSAQALVQVRAIVAAYNRSNGMNMLALSCLVTEPSGPPLQKPEPSPSLTWPPLRRLLPKAEISPEVWKLLLAINRFGSVNGGGLATLWRHLAHWPGLLSVLQASFAPLHRAGRLEKSVCAVHELSQDLAARMACMKEGRAVIPEPALQMVENYVAIPGAVTRMVTLGHAVGNWLDQEVE
|
| Protein name |
Rab-GAP TBC domain-containing protein
|
| Main knot |
61 (42%)
|
| Global pLDDT |
88.19
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
274
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.6 | 68-262 | 195 | 1-67, 263-274 | 67 | 12 |
|
Model Sequence |
MAEHGDDPVSAIAEEDAVGEVAEIFADIRATMDIPLLTSIWRTLVSVDGGLKSAWNAAKPLYQSGYPQAALASIVGSDRLPILERLVPGQLECAGVSAQALVQVRAIVAAYNRSNGMNMLALSCLVTEPSGPPLQKPEPSPSLTWPPLRRLLPKAEISPEVWKLLLAINRFGSVNGGGLATLWRHLAHWPGLLSVLQASFAPLHRAGRLEKSVCAVHELSQDLAARMACMKEGRAVIPEPALQMVENYVAIPGAVTRMVTLGHAVGNWLDQEVE
|
| Domain |
Bacteria
|
| Family |
Rhodospirillaceae
|
| Species (Full Name) |
Rhodospirillaceae bacterium
|
| Gene |
CMM33_07145
|
| PDB structures (whole Protein) |
-
|
A0A2E4I6L3