| Protein name |
tRNA_edit domain-containing protein
|
| Main knot |
31 (60%)
|
| Global pLDDT |
84.29
|
| Species |
Oceanospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2E8ZTV2
|
| PDB structures |
-
|
| Model length |
210
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
90.4 | 2-107 | 106 | 1-1, 108-210 | 1 | 103 |
|
Model Sequence |
MIQIHATKKLLAKMPAQTKPGAEDILAAPQSKLGSWHANLLTIQRRNCLLFVHDQTRFPLFIPALTKPDLANIDWCFEDVLMNTLLKCNATEKQRITAAALLQPLAFVGGTDRSVLGTLNRTAQDIEHSIYFDSLDVAELTGYSLSAWMAQRPCMVKNSKDFIMPGKAFLAMLDDLHPGKKPTGRKKAEQEPLPDNVVMLDLFRDDNEEQ
|
| Protein name |
tRNA_edit domain-containing protein
|
| Main knot |
31 (54%)
|
| Global pLDDT |
87.89
|
| Species |
Oceanospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
210
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.7 | 2-107 | 106 | 1-1, 108-210 | 1 | 103 |
|
Model Sequence |
MIQIHATKKLLAKMPAQTKPGAEDILAAPQSKLGSWHANLLTIQRRNCLLFVHDQTRFPLFIPALTKPDLANIDWCFEDVLMNTLLKCNATEKQRITAAALLQPLAFVGGTDRSVLGTLNRTAQDIEHSIYFDSLDVAELTGYSLSAWMAQRPCMVKNSKDFIMPGKAFLAMLDDLHPGKKPTGRKKAEQEPLPDNVVMLDLFRDDNEEQ
|
| Domain |
Bacteria
|
| Family |
Oceanospirillaceae
|
| Species (Full Name) |
Oceanospirillaceae bacterium
|
| Gene |
CMI03_14465
|
| PDB structures (whole Protein) |
-
|
A0A2E8ZTV2