A0A2E9QKS9 | AlphaKnot 2.0

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Information

Protein name	PepSY_like domain-containing protein
Main knot	5₁ (80%)
Global pLDDT	88.77
Species	Flavobacteriales bacterium
UniProt	A0A2E9QKS9
Structure Prediction Model	AlphaFold v6: A0A2E9QKS9
PDB structures	-
Model length	111
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.06	24-89	66	1-23, 90-111	23	22		Knot
					90.06	37-77	41	1-36, 78-111	36	34		Knot

MRNMLFILVAILCAMNIQAQKVFSVRYASQADIKVFVEKYESMADLAVYKVDYENRAVINNGQWFFVDYESEADKKIFFVDYASQADVTIFFTKYINRAGWKKKEKIHLFY

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Categories voted by users:

Information

Protein name	PepSY_like domain-containing protein
Main knot	5₁ (81%)
Global pLDDT	89.07
Species	Flavobacteriales bacterium
UniProt	A0A2E9QKS9
Structure Prediction Model	AlphaFold v4: A0A2E9QKS9
PDB structures	-
Model length	111
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.3	22-91	70	1-21, 92-111	21	20

MRNMLFILVAILCAMNIQAQKVFSVRYASQADIKVFVEKYESMADLAVYKVDYENRAVINNGQWFFVDYESEADKKIFFVDYASQADVTIFFTKYINRAGWKKKEKIHLFY

Comments

Categories voted by users:

Information

Protein name	PepSY_like domain-containing protein
Main knot	7₁ (89%)
Global pLDDT	64.77
Species	Flavobacteriales bacterium
UniProt	A0A2E9QKS9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	111
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					42.4	20-90	71	1-19, 91-111	19	21

MRNMLFILVAILCAMNIQAQKVFSVRYASQADIKVFVEKYESMADLAVYKVDYENRAVINNGQWFFVDYESEADKKIFFVDYASQADVTIFFTKYINRAGWKKKEKIHLFY

Comments

Domain	Bacteria
Family	unclassified Flavobacteriales
Species (Full Name)	Flavobacteriales bacterium
Gene	CMD28_06275
PFAM codes	PF19647
InterPro codes	IPR046148
PDB structures (whole Protein)	-

A0A2E9QKS9F1