| Protein name |
RepB domain-containing protein
|
| Main knot |
61 (52%)
|
| Global pLDDT |
89.5
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2G4IIS3
|
| PDB structures |
-
|
| Model length |
279
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.1 | 61-268 | 208 | 1-60, 269-279 | 60 | 11 |
|
Model Sequence |
MAETALSEVKEADATGVISEIYADIRHALRVPMVNLIFRHMATVPGCLEWVWGTLGPIYTTGQVITAAETLLADRKPLPLHFSASEIASWNIDTAAVARTCESYGRANPVNLLGLKALQFIMVESAQARARRKPARGQPLKAPAVELPLLPPMADMATLTGEVKTTLLALTQQLHGHDGRVIPSFYRHFTAWPGLLAGLRTQLQPLIDSGSLMEAADALNRNAHGAARMLYLDSPVTRIEPPSDAVLASLTELIDLFPPNICKMTLIARALGAAIRAQP
|
| Protein name |
RepB domain-containing protein
|
| Main knot |
61 (47%)
|
| Global pLDDT |
86.15
|
| Species |
Rhodospirillaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
279
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
88.8 | 51-267 | 217 | 1-50, 268-279 | 50 | 12 |
|
Model Sequence |
MAETALSEVKEADATGVISEIYADIRHALRVPMVNLIFRHMATVPGCLEWVWGTLGPIYTTGQVITAAETLLADRKPLPLHFSASEIASWNIDTAAVARTCESYGRANPVNLLGLKALQFIMVESAQARARRKPARGQPLKAPAVELPLLPPMADMATLTGEVKTTLLALTQQLHGHDGRVIPSFYRHFTAWPGLLAGLRTQLQPLIDSGSLMEAADALNRNAHGAARMLYLDSPVTRIEPPSDAVLASLTELIDLFPPNICKMTLIARALGAAIRAQP
|
| Domain |
Bacteria
|
| Family |
Rhodospirillaceae
|
| Species (Full Name) |
Rhodospirillaceae bacterium
|
| Gene |
CK529_13530
|
| PDB structures (whole Protein) |
-
|
A0A2G4IIS3