A0A2H3JUA7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (48%)
Global pLDDT	89.16
Species	strain MD-104
UniProt	A0A2H3JUA7
Structure Prediction Model	AlphaFold v4: A0A2H3JUA7
PDB structures	-
Model length	322
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.4	11-222	212	1-10, 223-322	10	100

Model Sequence

MSEGDEQSGWQLTESDPGVFTELLKSLGVPLVVDDLYSLDPASLAELQPVHAFIFLFKWVGSSSEPAGGNYDPDFPGFFAHQVVNNACATLAVMNAIGNIPGLPMGAQLTDLINFTTGMDAQTRGMVLTSSDWLREAHNALSPPSAISLDGLGLPKTSEDAYHFIVYMPYMSCVYEFDGLKHSPINHGAYSESGEGWVAKAREVIEARIATYPAGALEFSLLALHEDPLPILQAQLAELQAAGMQSEAADLVVRLSTENSKRERWAFENSLRRHNYVGLVHALLVALAKSGRLEAATENAKKTMRERVERSKEKGDNNMDET

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (81%)
Global pLDDT	90.61
Species	strain MD-104
UniProt	A0A2H3JUA7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	322
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.8	12-222	211	1-11, 223-322	11	100

Model Sequence

Comments

Domain	Eukaryota
Family	Laetiporaceae
Species (Full Name)	Wolfiporia cocos (strain MD-104) (Brown rot fungus)
Gene	WOLCODRAFT_103747
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A2H3JUA7F1

AF4

Model Sequence

ESM1

Model Sequence