| Protein name |
TonB-dependent receptor
|
| Main knot |
31 (73%)
|
| Global pLDDT |
87.46
|
| Species |
bacterium HR14
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2H5WL74
|
| PDB structures |
-
|
| Model length |
256
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.9 | 147-254 | 108 | 1-146, 255-256 | 146 | 2 |
|
Model Sequence |
MLTATGVGLLPQDEPNRARAYLKARGYARLDALANLLMLIDRVQIDAQYTGADYMMQSEVLRASVTGFVRGAQILDERKIFIEGQEAVQVTVGTAMYGKNGLSRLLLRPSPATPEPASDPTLPRIDLLAPNTPAPTTLTVEGNYTGLIIDARGLKVQPAMAPRILKADGTPLYGVGNFDIDMVIEKGLASYHRDMGAARSDPRAGSNPLVLRPIGVYRRSAATTDVVLSDADAAKLLTEDARTGFLKQLKVVFVVD
|
| Protein name |
TonB-dependent receptor
|
| Main knot |
31 (68%)
|
| Global pLDDT |
89.71
|
| Species |
bacterium HR14
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
256
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.1 | 1-256 | 256 | 0 | 0 |
|
Model Sequence |
MLTATGVGLLPQDEPNRARAYLKARGYARLDALANLLMLIDRVQIDAQYTGADYMMQSEVLRASVTGFVRGAQILDERKIFIEGQEAVQVTVGTAMYGKNGLSRLLLRPSPATPEPASDPTLPRIDLLAPNTPAPTTLTVEGNYTGLIIDARGLKVQPAMAPRILKADGTPLYGVGNFDIDMVIEKGLASYHRDMGAARSDPRAGSNPLVLRPIGVYRRSAATTDVVLSDADAAKLLTEDARTGFLKQLKVVFVVD
|
| Domain |
Bacteria
|
| Family |
unclassified Bacteria
|
| Species (Full Name) |
bacterium HR14
|
| Gene |
HRbin14_00405
|
| PDB structures (whole Protein) |
-
|
A0A2H5WL74