A0A2J6Q2S6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)
Main knot	3₁ (97%)
Global pLDDT	70.44
Species	Hyaloscypha hepaticicola
UniProt	A0A2J6Q2S6
Structure Prediction Model	AlphaFold v4: A0A2J6Q2S6
PDB structures	-
Model length	389
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.6	80-127	48	1-79, 128-389	79	262

Model Sequence

MVRHKKDNFSSRGKKYNNTPRARGPRDDDEDGDHPASRPSFKAACWDLGHCDPKRCSGKKLMKLGLMRELHVGQKHSGVIISPNAKQTISPADRELMEQYGAAVVECSWARVKEVPWPKIGGKCERLLPYLVAANSVNYGKPWRLNCVEALGAAFYICGHQEWAEDVLSHFSYGEAFLEINSSILKRYAACKDEADIKKTEEAWMARLEKEYTDSRADGEDGPETDMWKGGNSNHRAAVSSDDEDEDGEREEGGSEDEMGGIYLGKKPPTTTEEPEEEKDPFGISDDEDDEEEMAELRRRVLASKPFSNPTDSGQKKPPEKVSRPIPLKEDSDIEADSDNGDDDEFDNIINATPVTDRIGIQAKQKAKTAEPLASAVFSRTVVGAPKKW

Comments

ESM1

Categories voted by users:

Information

Protein name	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)
Main knot	3₁ (91%)
Global pLDDT	68.67
Species	Hyaloscypha hepaticicola
UniProt	A0A2J6Q2S6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	389
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					61.0	81-139	59	1-80, 140-389	80	250

Model Sequence

Comments

Domain	Eukaryota
Family	Hyaloscyphaceae
Species (Full Name)	Hyaloscypha hepaticicola
Gene	TSR3 NA56DRAFT_749550
PFAM codes	PF04034, PF04068
InterPro codes	IPR007177, IPR007209, IPR022968
PDB structures (whole Protein)	-

A0A2J6Q2S6F1

AF4

Model Sequence

ESM1

Model Sequence