| Protein name |
Geranylgeranyl pyrophosphate synthetase
|
| Main knot |
52 (53%)
|
| Global pLDDT |
86.19
|
| Species |
Hyaloscypha bicolor
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2J6TR03
|
| PDB structures |
-
|
| Model length |
392
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
83.2 | 39-302 | 264 | 1-38, 303-392 | 38 | 90 |
|
Model Sequence |
MTRLVDWASGKLIKVINVSNFLDTETSPKIERCEYLTSYNWFDHPKHPTILVPGSPPLWSPSLSTKRLDEDSGEYFRDPNAARYSRYPIEPIFRALLAIHPDANLSSFDIIGCGSTLGNLLRFCGGIDKDFRFDIDRIGDTVFFIRKESSPTALIPSVCGYGHSFPEAHTMWEPDVKGSASHQRIIQYDFGGLKFLVRSESDGYLKQAVDRNAQLNDAAMANTSEDLPELKETLASEADNYSLLEDLRVSGGPSSTGGPLHIEMRGRRIPQKAIFDLKTRAKETRRPIDMDEVYRRLWVNQTPYFIFAEHFRGSFEPRNIQPMFVSNEISKWEIDREALLKHYQAVIMEILAATRGSATGKLQAIRRGSGSLKIQERIAGDDVLPYDLRSNW
|
| Protein name |
Geranylgeranyl pyrophosphate synthetase
|
| Main knot |
01 (63%)
|
| Species |
Hyaloscypha bicolor
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
392
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MTRLVDWASGKLIKVINVSNFLDTETSPKIERCEYLTSYNWFDHPKHPTILVPGSPPLWSPSLSTKRLDEDSGEYFRDPNAARYSRYPIEPIFRALLAIHPDANLSSFDIIGCGSTLGNLLRFCGGIDKDFRFDIDRIGDTVFFIRKESSPTALIPSVCGYGHSFPEAHTMWEPDVKGSASHQRIIQYDFGGLKFLVRSESDGYLKQAVDRNAQLNDAAMANTSEDLPELKETLASEADNYSLLEDLRVSGGPSSTGGPLHIEMRGRRIPQKAIFDLKTRAKETRRPIDMDEVYRRLWVNQTPYFIFAEHFRGSFEPRNIQPMFVSNEISKWEIDREALLKHYQAVIMEILAATRGSATGKLQAIRRGSGSLKIQERIAGDDVLPYDLRSNW
|
| Domain |
Eukaryota
|
| Family |
Hyaloscyphaceae
|
| Species (Full Name) |
Hyaloscypha bicolor E
|
| Gene |
K444DRAFT_519004
|
| PDB structures (whole Protein) |
-
|
A0A2J6TR03