A0A2K4XEI5F1

Type VI secretion protein T6SSi_tssM
AF6
Categories voted by users:
Information
Protein name
Type VI secretion protein T6SSi_tssM
Main knot
84 (51%)
Global pLDDT
76.28
Species
Pseudoalteromonas carrageenovora
UniProt
Structure Prediction Model
AlphaFold v6:  A0A2K4XEI5
PDB structures
-
Model length
1170
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
76.5 75-1036 962 1-74, 1037-1170 74 134 Knot
Model Sequence
MSFSQKIKKVTYALTSRTAMLIIGFLALSLLIWFGGPLIAIADYVPLQSIAARLFTIILVLLVFSVSKIYRLMQQSKRDEKMADELIDSNSDTNSSEVNEEITTLKTRMNEAIDLLKDVKLFKGKNIYQLPWYIMIGPPGAGKTTVIHNSGLDYPLKDKLGVDLVHGVGGTRNCDWWFTNKAVLIDTAGRYTTQSSHAKHDSRAWEGFLGLLRKYRPLRPINGVMISMGISELMSQTKTERNLHARAIKQRLQELQSQLGMTFPVYVIFSKVDLIEGFREFFGELTEEECEQVWGVTFELDLDKDTQVDAFNKESHTLISKLTEMLNRRLINERNEEIRAKIFEFPRQLRVLQGVGDAFLKEIFTPNAYEELPMFRGVYLTSATQEGTPSSFLNEANAGESGYINQSKSFFIKNVLEGVIFPEQNLASTNKHHDKQNKWLRVGSISLACIALFGFSTSWYFSFAWNSNLISETEDAIATYQELDTASFDRNNLLVLNDRLKALRNLPASNPELVNTQESKSIGFNKLNEIKMASTQAYDRSLQTYLEPFIASTLIKEMEAHPEHLSYLYETLKCYLMLFQPEYFEGEDITVWFNAYLERNLPGDKNMQTRVELMEHVATLLENGVSQIEIDNQAVRVARAELTKLPIAERAYQRLQADFLDSSIPPFRLTDIISFESAQKFTFRNDGELTRSIPGLYTFNGFHGIFNVEKSKMLGNLMASSWVYGEEATGTYDISKDEIEKKLEQRYFQDYIYYWQSFIDDLSLNQYSSPAEGVNITDALAGSEAPIKNIITAVQKNVQLTKLPVSDNQKAAGKVAANAAEIAMQTKANRIKRFLPDEAPKFDIKLPGHQVEEAFEDVINIDAQQLDNIQKNLRELNVYLTKLDRGDQLKSSIKDQISGKSKPSFIRQLEFQSRDLPYPFNSWLLDISRDTSNITKNSANRHLNEMWKSKVLREYNAAIVGRYPFSPYANKEVNMKDFTRFFSPGGTIDSFFTNYIAPSVDMSSTPWKFEKDIGISRDTLAMFELANQIQTVFFDGGSATPRIEFGLRTVELDQSVSKFRVEIDGQSMSYRHGPIKITNFVWPGSSGQSNTRIEFTPPSGGRPINTTYQGEWSLYRMLDELSAKRAKTREDLELHFSLMGNNAKVELLPKSIRHPFWNKSVEKFSCPTRL
Comments
AF4
Categories voted by users:
Information
Protein name
Type VI secretion protein T6SSi_tssM
Main knot
84 (47%)
Global pLDDT
76.79
Species
Pseudoalteromonas carrageenovora
UniProt
Structure Prediction Model
AlphaFold v4:  A0A2K4XEI5
PDB structures
-
Model length
1170
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
76.5 73-1035 963 1-72, 1036-1170 72 135
Model Sequence
MSFSQKIKKVTYALTSRTAMLIIGFLALSLLIWFGGPLIAIADYVPLQSIAARLFTIILVLLVFSVSKIYRLMQQSKRDEKMADELIDSNSDTNSSEVNEEITTLKTRMNEAIDLLKDVKLFKGKNIYQLPWYIMIGPPGAGKTTVIHNSGLDYPLKDKLGVDLVHGVGGTRNCDWWFTNKAVLIDTAGRYTTQSSHAKHDSRAWEGFLGLLRKYRPLRPINGVMISMGISELMSQTKTERNLHARAIKQRLQELQSQLGMTFPVYVIFSKVDLIEGFREFFGELTEEECEQVWGVTFELDLDKDTQVDAFNKESHTLISKLTEMLNRRLINERNEEIRAKIFEFPRQLRVLQGVGDAFLKEIFTPNAYEELPMFRGVYLTSATQEGTPSSFLNEANAGESGYINQSKSFFIKNVLEGVIFPEQNLASTNKHHDKQNKWLRVGSISLACIALFGFSTSWYFSFAWNSNLISETEDAIATYQELDTASFDRNNLLVLNDRLKALRNLPASNPELVNTQESKSIGFNKLNEIKMASTQAYDRSLQTYLEPFIASTLIKEMEAHPEHLSYLYETLKCYLMLFQPEYFEGEDITVWFNAYLERNLPGDKNMQTRVELMEHVATLLENGVSQIEIDNQAVRVARAELTKLPIAERAYQRLQADFLDSSIPPFRLTDIISFESAQKFTFRNDGELTRSIPGLYTFNGFHGIFNVEKSKMLGNLMASSWVYGEEATGTYDISKDEIEKKLEQRYFQDYIYYWQSFIDDLSLNQYSSPAEGVNITDALAGSEAPIKNIITAVQKNVQLTKLPVSDNQKAAGKVAANAAEIAMQTKANRIKRFLPDEAPKFDIKLPGHQVEEAFEDVINIDAQQLDNIQKNLRELNVYLTKLDRGDQLKSSIKDQISGKSKPSFIRQLEFQSRDLPYPFNSWLLDISRDTSNITKNSANRHLNEMWKSKVLREYNAAIVGRYPFSPYANKEVNMKDFTRFFSPGGTIDSFFTNYIAPSVDMSSTPWKFEKDIGISRDTLAMFELANQIQTVFFDGGSATPRIEFGLRTVELDQSVSKFRVEIDGQSMSYRHGPIKITNFVWPGSSGQSNTRIEFTPPSGGRPINTTYQGEWSLYRMLDELSAKRAKTREDLELHFSLMGNNAKVELLPKSIRHPFWNKSVEKFSCPTRL
Comments
Domain Bacteria
Family Pseudoalteromonadaceae
Species (Full Name) Pseudoalteromonas carrageenovora IAM 12662
Gene tssM PCAR9_B0238
PFAM codes  PF06744,  PF06761,  PF14331
InterPro codes  IPR009612,  IPR010623,  IPR017731,  IPR025743,  IPR027417
PDB structures (whole Protein) -
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