A0A2M8AQN1 | AlphaKnot 2.0

AF4

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Information

Protein name	rRNA methyltransferase
Main knot	3₁ (86%)
Global pLDDT	92.81
Species	Flavobacteriaceae bacterium
UniProt	A0A2M8AQN1
Structure Prediction Model	AlphaFold v4: A0A2M8AQN1
PDB structures	-
Model length	271
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.0	199-240	42	1-198, 241-271	198	31

Model Sequence

MNKQINSIQNPYIKQLVQLKDKARERKKSGLFLIEGEREIMLAVKGGYALETILFNPEIMSAEQLNSLITNVRLSAVEVRIIEITQDVYQKLAYRDTTEGILAVAKSKTHGMSELKFSSKNPLILVAEAPEKPGNIGALLRTADAAHVDAVIIANPKTDLYNPNIIRSSVGCVFTNQIATGTTSEIIAFLKSNNIPIYCAALQASVHYTSPDFTKPTAIVVGTEATGLSDAWLEHSTQNIIIPMHGEIDSMNVSVAAGILIFEAKRQRINN

Comments

ESM1

Categories voted by users:

Information

Protein name	rRNA methyltransferase
Main knot	3₁ (79%)
Global pLDDT	95.77
Species	Flavobacteriaceae bacterium
UniProt	A0A2M8AQN1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	271
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.0	35-121	87	1-34, 122-271	34	150

Model Sequence

Comments

Domain	Bacteria
Family	Flavobacteriaceae
Species (Full Name)	Flavobacteriaceae bacterium CG_4_9_14_3_um_filter_33_16
Gene	CO117_00175
PFAM codes	PF00588
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A2M8AQN1F1

AF4

Model Sequence

ESM1

Model Sequence