| Protein name |
Integral membrane protein
|
| Main knot |
52 (44%)
|
| Global pLDDT |
88.3
|
| Species |
Sedimenticola sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2N6GEM9
|
| PDB structures |
-
|
| Model length |
332
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
87.8 | 22-242 | 221 | 1-21, 243-332 | 21 | 90 |
|
Model Sequence |
MIELMNNQLTFRFPEVHQKAACSIDFQRTLRIPDDNREYPLPPGLGRFPVEHVDDFANKLPDTWRSHGGVFIPMYQSEALWINFSGDYPCAVKIAAGKINAVSGETWSNGLSADPQDYAVIPEQPWLDGFNVSEDFIRQFVAMPLGEGFTAEEQITGKAEHGGLQIIVYPMKHDVYVEHFERAVEADLDYLDMPMFSRTVCESAAPDMGLAPGGLMRQEIYEDEYGIDAWDQDNGFRCFIHLANSEQYQMITGHQPPHKPATAKDYTEAGLPWFDYYDDSKALAGSDTLGKLTSVAAKVIEKGKGLLPDNEPVHPKTVKIISKGNVVRDGEF
|
| Protein name |
Integral membrane protein
|
| Main knot |
52 (58%)
|
| Global pLDDT |
69.74
|
| Species |
Sedimenticola sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
332
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
85.5 | 26-265 | 240 | 1-25, 266-332 | 25 | 67 |
|
Model Sequence |
MIELMNNQLTFRFPEVHQKAACSIDFQRTLRIPDDNREYPLPPGLGRFPVEHVDDFANKLPDTWRSHGGVFIPMYQSEALWINFSGDYPCAVKIAAGKINAVSGETWSNGLSADPQDYAVIPEQPWLDGFNVSEDFIRQFVAMPLGEGFTAEEQITGKAEHGGLQIIVYPMKHDVYVEHFERAVEADLDYLDMPMFSRTVCESAAPDMGLAPGGLMRQEIYEDEYGIDAWDQDNGFRCFIHLANSEQYQMITGHQPPHKPATAKDYTEAGLPWFDYYDDSKALAGSDTLGKLTSVAAKVIEKGKGLLPDNEPVHPKTVKIISKGNVVRDGEF
|
| Domain |
Bacteria
|
| Family |
unclassified Sedimenticola
|
| Species (Full Name) |
Sedimenticola sp
|
| Gene |
C0631_12780
|
| PDB structures (whole Protein) |
-
|
A0A2N6GEM9