| Protein name |
Heme utilization protein
|
| Main knot |
51 (72%)
|
| Global pLDDT |
72.02
|
| Species |
Pseudomonas sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2N7Z1U2
|
| PDB structures |
-
|
| Model length |
249
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
78.1 | 48-229 | 182 | 1-47, 230-249 | 47 | 20 |
|
Model Sequence |
MKPQMALKPMVFALAALMAAAAQAGGGGWHPAPQPTGVVASVVTDVQNSIGNKFDDTKTENNASNDNSVNSNSGNVGVNVQSGSGNLADNSGAVSNAKGDFATVFAVVDVNQNSALNNFINKGTQNNASVDNGINGNSGNVGYNGQAGQGNQAKNNLVITTADGKNIAAAANTEQNSLANNYLNTAATSHGYGYGGKPQYVSNNSSLDNSVNRNSGNVGVNLQSGAGNQGSNSFSIGQGCSVCGSGVRF
|
| Protein name |
Heme utilization protein
|
| Main knot |
819 (76%)
|
| Global pLDDT |
66.63
|
| Species |
Pseudomonas sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
249
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
53.1 | 59-220 | 162 | 1-58, 221-249 | 58 | 29 |
|
Model Sequence |
MKPQMALKPMVFALAALMAAAAQAGGGGWHPAPQPTGVVASVVTDVQNSIGNKFDDTKTENNASNDNSVNSNSGNVGVNVQSGSGNLADNSGAVSNAKGDFATVFAVVDVNQNSALNNFINKGTQNNASVDNGINGNSGNVGYNGQAGQGNQAKNNLVITTADGKNIAAAANTEQNSLANNYLNTAATSHGYGYGGKPQYVSNNSSLDNSVNRNSGNVGVNLQSGAGNQGSNSFSIGQGCSVCGSGVRF
|
| Domain |
Bacteria
|
| Family |
Pseudomonadaceae
|
| Species (Full Name) |
Pseudomonas sp. GW456-11-11-14-LB4
|
| Gene |
C1X16_19385
|
| PDB structures (whole Protein) |
-
|
A0A2N7Z1U2